Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq230 168 2e-36
seq182 165 2e-35
seq70 165 2e-35
seq292 86.0 1e-11
>seq230
Length=21327
Score = 168 bits (186), Expect = 2e-36
Identities = 160/202 (79%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| ||||||||||||||||| | ||||| || | ||||||||| ||
Sbjct 13654 TCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 13595
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | || || ||||| ||||| | || ||||||||| || ||||||||||| ||
Sbjct 13594 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 13535
Query 225618 GTCTTGGATCTTTTGCTTCACAGCT-TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGA 225676
||||||||| ||| |||| | | ||||||||||| |||| ||| || |||| ||||
Sbjct 13534 GTCTTGGAT-TTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGACTTCTAGAGTGA 13476
Query 225677 TCGTCTTGCCCGTCAAAGTTTT 225698
| ||||| || || || |||||
Sbjct 13475 TAGTCTTACCAGTTAAGGTTTT 13454
>seq182
Length=55006
Score = 165 bits (182), Expect = 2e-35
Identities = 170/220 (77%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| || |||||||||||||| | ||||| || | ||||||||| ||
Sbjct 1881 TCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 1822
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | || || ||||| ||||| | || ||||||||| || || |||||||| ||
Sbjct 1821 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTT 1762
Query 225618 GTCTTGGATCTTTTGCTTCA-CAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGA 225676
||||||||| ||| |||| | || || |||||||| |||| ||| || || || || |
Sbjct 1761 GTCTTGGAT-TTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAA 1703
Query 225677 TCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
| || || || ||||||||||| | ||| | |||||| ||
Sbjct 1702 TGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTT 1663
>seq70
Length=20209
Score = 165 bits (182), Expect = 2e-35
Identities = 168/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | |||||| || || || ||||||| ||||| |||| ||| ||||| ||
Sbjct 19589 TCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCC 19648
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||| || ||||| || || | || ||||||||| || ||||| ||||| ||
Sbjct 19649 GTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTT 19708
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||| |||||||| ||| || |||||||||||||||| ||| || || || |||||
Sbjct 19709 GTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAAGTGAT 19768
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| || || ||||||||||| | || | |||||||||
Sbjct 19769 GGTTTTCCCAGTCAAAGTTTTAACAAAAATTTGCATTTT 19807
>seq292
Length=12203
Score = 86.0 bits (94), Expect = 1e-11
Identities = 82/104 (79%), Gaps = 1/104 (1%)
Strand=Plus/Plus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
||| ||||||||||| |||||||||||||||||||| | | ||||| || || ||||
Sbjct 4665 TTCTGGATGACCAAAGAATCAGAATAAATGTTGATATAATACTGGATCACCACCACCTGC 4724
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA-AACA 370774
| ||||| || ||||||||| |||||||| |||| ||||
Sbjct 4725 TACTTCAAAGAATGAAGTATTAAAGTTTCTATCCATTAATAACA 4768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192526539811670
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |