Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_030240.1
Length=128058
Score E
Sequences producing significant alignments: (Bits) Value
seq182 131 1e-25
seq230 102 7e-17
seq70 102 7e-17
>seq182
Length=55006
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071
|| |||| |||||| || |||| ||| | || |||||||||||||| ||||| || | |
Sbjct 1892 CCACCTCTCAATCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGAC 1833
Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131
| |||| | ||||||||||||||| || ||| | || | ||||||||||| ||
Sbjct 1832 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 1773
Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191
| ||||||||||| ||||| ||| |||| | | | || || | ||| |
Sbjct 1772 ATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACT 1713
Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238
|| | |||||| ||||| || ||||| ||||||| |||||||||||
Sbjct 1712 TCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCAT 1666
>seq230
Length=21327
Score = 102 bits (112), Expect = 7e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071
|| |||| |||||| || |||| ||| | ||| |||||||||||||| ||||| || | |
Sbjct 13665 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 13606
Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131
| |||| | ||||||||||||||| || ||| | || | ||||||||||| ||
Sbjct 13605 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 13546
Query 101132 ACGCCTTCTTTGTC 101145
| |||||||||||
Sbjct 13545 ATACCTTCTTTGTC 13532
>seq70
Length=20209
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071
|| |||| |||||| || |||| ||| | || || || ||||| || ||||| |||| |
Sbjct 19578 CCACCTCTCAATCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGAC 19637
Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131
| ||| || |||||||| ||||| || ||| | || | ||||||||||| ||
Sbjct 19638 AACGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGA 19697
Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191
| ||||||||||| || || || || | | | | || |||| ||| |
Sbjct 19698 ATCCCTTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACT 19757
Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATTATT 101242
|| | || || ||||| || ||||| ||||||| ||||||||||||| ||
Sbjct 19758 TCCAAAGTGATGGTTTTCCCAGTCAAAGTTTTAACAAAAATTTGCATTTTT 19808
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 409659277213995
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |