Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq140 279 4e-70
>seq140
Length=127049
Score = 279 bits (308), Expect = 4e-70
Identities = 581/853 (68%), Gaps = 17/853 (2%)
Strand=Plus/Plus
Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306
|||||| |||||| || || || |||| ||||| |||||||| ||||| ||| ||||
Sbjct 6241 AACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGCTAA 6300
Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAG 4366
||||||||||||||||||||||| ||||| | | || |||| ||||||| ||
Sbjct 6301 TGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCATTACCTAA 6360
Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTC-GCAGTTAA 4425
|| || | |||| ||||| |||||||| | ||| || |||| | | | ||| || |
Sbjct 6361 TGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCA-TTCA 6419
Query 4426 TTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTC-TTGTTCTATAGTTACGGCT 4484
| || | ||| ||||| | || | | |||||| || || ||| |||| || |||
Sbjct 6420 TACCTAATAAAGAAACAGGCAATGCATCT-TCAAAATATCTTTTTTCAATAGAAACAGCT 6478
Query 4485 TCTGTGATTATATCTTTTATTTTATCTTTAGA--TGGTTTATTTACTAAGTATCCAAACA 4542
|| || || || ||||| | || ||| || |||||||||| | || | | ||| |
Sbjct 6479 TCAGTAATAAT-TCTTTCA-GCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAATA 6536
Query 4543 ATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACG 4602
||| ||| ||||||||| || | ||||| ||||| | ||||| ||| || ||||| |
Sbjct 6537 ATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAAG 6596
Query 4603 TTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAA 4662
| || || ||||| || || | || || | |||||| || || |||||||| || ||||
Sbjct 6597 TCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAAA 6656
Query 4663 AGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT 4722
|||| | ||||| || || ||||| || || |||| | || | ||| |
Sbjct 6657 AGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCAT 6716
Query 4723 CTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAG 4782
||| ||||||| | | ||||| | |||||||| || | ||||| || | ||||
Sbjct 6717 CTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATAG 6776
Query 4783 CGTT---AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGC 4839
| || || |||| ||||| || ||| |||| |||||||| || || | ||
Sbjct 6777 CATTGAACAAGAATTCACTTTCTT---TTGGATCTTTGATATAAGTATCGATCAAAAGCG 6833
Query 4840 TATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTT 4899
||| ||||| ||| |||||||| || || || || |||||||| ||| ||||||
Sbjct 6834 AATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTT 6893
Query 4900 CTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCAC 4959
||| | || ||||| || || | || || || || || || || || || ||
Sbjct 6894 CTGGAATCTGCACTTCAGCACTGAAATTCTCCACCAAATTCTCATTGACAATCCCATCTG 6953
Query 4960 TGGCTGCAAAAAACGCCAAAACATGAGATAT-AAAGTACTGT--TCGTCAGGCTTAAGTT 5016
|| || ||||| || ||||| | || ||| || | | ||| | | |
Sbjct 6954 AAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTAT 7013
Query 5017 TTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTT 5076
| ||||||| | | | |||||| | | ||| | |||||| |||||||||| || ||||
Sbjct 7014 TATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGCTT 7073
Query 5077 CCGCTTTTTTGTA 5089
| || ||||||
Sbjct 7074 CAGCACGTTTGTA 7086
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427048012576565
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |