Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq140 279 4e-70 >seq140 Length=127049 Score = 279 bits (308), Expect = 4e-70 Identities = 581/853 (68%), Gaps = 17/853 (2%) Strand=Plus/Plus Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306 |||||| |||||| || || || |||| ||||| |||||||| ||||| ||| |||| Sbjct 6241 AACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGCTAA 6300 Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAG 4366 ||||||||||||||||||||||| ||||| | | || |||| ||||||| || Sbjct 6301 TGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCATTACCTAA 6360 Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTC-GCAGTTAA 4425 || || | |||| ||||| |||||||| | ||| || |||| | | | ||| || | Sbjct 6361 TGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCA-TTCA 6419 Query 4426 TTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTC-TTGTTCTATAGTTACGGCT 4484 | || | ||| ||||| | || | | |||||| || || ||| |||| || ||| Sbjct 6420 TACCTAATAAAGAAACAGGCAATGCATCT-TCAAAATATCTTTTTTCAATAGAAACAGCT 6478 Query 4485 TCTGTGATTATATCTTTTATTTTATCTTTAGA--TGGTTTATTTACTAAGTATCCAAACA 4542 || || || || ||||| | || ||| || |||||||||| | || | | ||| | Sbjct 6479 TCAGTAATAAT-TCTTTCA-GCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAATA 6536 Query 4543 ATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACG 4602 ||| ||| ||||||||| || | ||||| ||||| | ||||| ||| || ||||| | Sbjct 6537 ATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAAG 6596 Query 4603 TTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAA 4662 | || || ||||| || || | || || | |||||| || || |||||||| || |||| Sbjct 6597 TCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAAA 6656 Query 4663 AGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT 4722 |||| | ||||| || || ||||| || || |||| | || | ||| | Sbjct 6657 AGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCAT 6716 Query 4723 CTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAG 4782 ||| ||||||| | | ||||| | |||||||| || | ||||| || | |||| Sbjct 6717 CTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATAG 6776 Query 4783 CGTT---AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGC 4839 | || || |||| ||||| || ||| |||| |||||||| || || | || Sbjct 6777 CATTGAACAAGAATTCACTTTCTT---TTGGATCTTTGATATAAGTATCGATCAAAAGCG 6833 Query 4840 TATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTT 4899 ||| ||||| ||| |||||||| || || || || |||||||| ||| |||||| Sbjct 6834 AATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTT 6893 Query 4900 CTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCAC 4959 ||| | || ||||| || || | || || || || || || || || || || Sbjct 6894 CTGGAATCTGCACTTCAGCACTGAAATTCTCCACCAAATTCTCATTGACAATCCCATCTG 6953 Query 4960 TGGCTGCAAAAAACGCCAAAACATGAGATAT-AAAGTACTGT--TCGTCAGGCTTAAGTT 5016 || || ||||| || ||||| | || ||| || | | ||| | | | Sbjct 6954 AAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTAT 7013 Query 5017 TTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTT 5076 | ||||||| | | | |||||| | | ||| | |||||| |||||||||| || |||| Sbjct 7014 TATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGCTT 7073 Query 5077 CCGCTTTTTTGTA 5089 | || |||||| Sbjct 7074 CAGCACGTTTGTA 7086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427048012576565