Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq82 533 2e-146 seq140 352 4e-92 >seq82 Length=13639 Score = 533 bits (590), Expect = 2e-146 Identities = 1476/2244 (66%), Gaps = 57/2244 (3%) Strand=Plus/Plus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 |||||||| || | || ||| || | || || | | |||||||| || ||||| | | Sbjct 11184 GTAAACTGGATGGCAGCAGAAGCAGCTTGGGTTCTCAAGTAGTACATCCCTGTTTTCAAA 11243 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 || | ||| ||||||||||||||| |||||||| | || | || Sbjct 11244 CCTTTAGACCACCCGTAGAAATGCATGGAGGTCAGTTTCCCCATTGTTGGGGCCATGATG 11303 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 || ||||| | || ||| |||||| |||||||| ||| ||||| ||||| | || Sbjct 11304 TGGATATTTAGAGAGTGAGATTGATCAATGAAAGCGGATCTGTCAGCAGCCATGTCGATG 11363 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 || |||||||||| | |||||||| |||||| | | | ||| | || | |||| | Sbjct 11364 ATCGTCTTTTGAGACAATTCCCAAACTGTTTTGTACAAGTCTTTCAATTCTTGAGGAATG 11423 Query 77022 TTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTT-ATATCATCATT 77077 |||| | ||||||||| || | | || || || | ||| ||| |||| || Sbjct 11424 TTTGGCAAGTGTTGAATGGACCCGTTGTTGGCAATGAT-GTTTGATTTCATAGCATCGTT 11482 Query 77078 CCACAATTTCCTC-TCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTC 77136 ||| ||| || || ||| |||| || | | ||||| || ||||| ||||| | Sbjct 11483 CCA-AATGCCCAAATCAACCAAATCTCTTAGCAAGTATGGATTGACAATTTGGAATTCAC 11541 Query 77137 CAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTC 77196 ||||||| ||| | || ||| || || || ||||||| | | |||| |||| | Sbjct 11542 CAGACAACGTTCTTCTAGAGTACATGTTTGAAGTGAATGGTTCGAAACATTCGTTGTAAC 11601 Query 77197 CCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGAC 77256 |||| ||||| | || || || |||||||| || |||| || || ||||| | | Sbjct 11602 CCAAGATTTGCGATGTTGATGCTGTTGGCATTGGAGCCAATAACAATGAGTTTCTCAATC 11661 Query 77257 CATGTGTTCTGA-TTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACA 77315 || || | | | |||| ||| | | | ||| ||| ||||| | ||| | || | | Sbjct 11662 CA-GTTTCCACAATTTTTTCTCTCAAAGATTCCCATTCCCACAAATCAGTTGGAGCTCTA 11720 Query 77316 TCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAA 77375 ||||| | || |||| | || || | ||| ||| || | | | || || Sbjct 11721 TCCCACATGTCAAATTGCAAAACACCTTGTGAAGCTGGTGAACCTTGGAAAGATTGGTAT 11780 Query 77376 GGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCG 77435 || |||||| | || | ||| | ||||||||| | | || | ||||||| Sbjct 11781 GGACCTTCTTCCACGGCCATTTCGTTTGAAGATTCCAATGCAGCATGGTACAATGTTTCG 11840 Query 77436 AAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGT-AAAAGAAT 77494 ||||| | |||| || | || |||| |||||| ||| | | | ||||| || Sbjct 11841 AAAATTTGAATATTCAGTTGTTTGGCTTGTTCGGAATCAAATGGA-ATTCTCAAAAGCAT 11899 Query 77495 AAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAAT 77554 ||| | ||| || || || ||||| |||| |||||||||| |||||| |||| || | Sbjct 11900 AAAAGTATCAGCCAAACCTTGAACACCAAGGGCAATAGGTCTGTGTCTCATATTTGAGTT 11959 Query 77555 TTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAAC 77614 | | || | | ||| |||||||| |||| || | | | || | |||||| || Sbjct 11960 TCTTGCAGTTTCCACAGGGTAATAATTTCTGTCAATGACTCTGTTCAAATTTCTTGTAAT 12019 Query 77615 TACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTT---------CCATCTATAAC 77665 ||||| | || || | || ||| | |||||| | || |||||| | Sbjct 12020 GACTTTTGCAACATCGTGTAATTTTTGGAAATCATAAGTTTGTTGTTGACCATCT-TCTG 12078 Query 77666 AAACAT----------GTTCAAAGCTATAGATGCTAGATTACAAACTGC---TACCTCAT 77712 |||||| | |||||| ||||| || | ||||||||| || | | || | Sbjct 12079 AAACATTGATGAAAGCGGGCAAAGCAATAGAAGCCAAATTACAAACAGCAGTTTCGTCGT 12138 Query 77713 TAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGAT 77772 || | | ||||| | || || ||| | |||| |||||||||| || | || Sbjct 12139 TATCT---GAATATTCCACAATTTCACAACACAAATTAGATGATTTGATAGTTCCTAAAT 12195 Query 77773 TTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTT 77832 ||| ||| || ||||| || || | || || |||| |||||| || || || |||| Sbjct 12196 TTTTTTGATTAGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGTACCTGTTT 12255 Query 77833 CAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTATC 77892 || | |||| ||| | |||| | ||| | | ||||| || | ||| || | Sbjct 12256 CAGTTTGTGCTTCCAAGATAGCATACCATAATTTTTGTGCTTTAATAGTT--TTTCTACC 12313 Query 77893 GCCTCTCTCTTT--CATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATC 77950 | || ||| ||||| | | || | |||||| || | || |||||||| Sbjct 12314 TCTTCCTTCTGAAACATATCTATTGTACAATTTTTCAAAATCTGCACCATAAACATCACT 12373 Query 77951 CAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTT 78010 || || || |||| |||| | | ||||| ||| || || ||| |||||| || Sbjct 12374 TAAACCTGGAGCTTCACTTGGAGAAAACAATGTCCAATCTGAATTTTCTTTAACTTTTTG 12433 Query 78011 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATT 78070 |||||| | ||| || | ||||| ||| ||| | ||||| | |||| |||||| || Sbjct 12434 CATAAATAAATCTGGAACCCATAATGCAGGAAACAAATCTCTTGCTCTAATTTCTTCTTT 12493 Query 78071 TCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATA 78130 || ||| || || ||| | ||| || | ||||||| |||||||||||||| ||| Sbjct 12494 ACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATGCCATGGTTCTAAATA 12553 Query 78131 TATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATT 78190 | || | | | ||||||| ||||||||| || ||||| | |||||| || || ||||| Sbjct 12554 AAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTTGCAGTATTATT 12613 Query 78191 ATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACT 78250 ||||||| | ||||||||| | || ||||| || ||||| || || | ||||||| Sbjct 12614 GAAAACTCTAATCATTGGAATCAATCCATTAGAAGTCCCATTAGTACCTGCAATATAAGA 12673 Query 78251 TCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAG 78310 || ||| | ||||||| ||| | || || || || || | ||||| || | Sbjct 12674 ACCGGTTGATCTAATATTATGAATATGAAGACCAATACCACCAGCAGTTTTAGAAATCAA 12733 Query 78311 AGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAG 78370 ||| || ||| || ||||| || ||||| || || || || |||| || ||| Sbjct 12734 AGCACATTCTTTTAAAGTATCATAAATACCATCAATGGAATCGTCTTTCATAGCAACAAG 12793 Query 78371 AAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATG 78430 ||||| |||||||||| | ||||| ||||| ||||| || ||||||||||| Sbjct 12794 GAAACATGAAGACATTTGAGGTCTTGGTGTTCCAGCATTGAATAAAGTTGGAGATGCATG 12853 Query 78431 CGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTG 78490 || || || | ||| | | ||| || ||||| | || ||| || || | Sbjct 12854 TGTGAAATATCTCAAAGACATCAAATTATAAGTTTCCAAGACTTTTTCAATATCTGAACC 12913 Query 78491 ATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATT 78550 |||||| || || || || | ||| | || ||| |||||||||||| | | | ||| Sbjct 12914 ATGAATCCCGACAGCAACTCTCATGATCAAATGTTGAGGTCTTTCAGCAATTTGTCCATT 12973 Query 78551 TATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 78610 ||| | || || || ||| ||||||| ||||| ||||||||||| || ||| || || Sbjct 12974 GATTCTTAATAAATACGATCTTTCCAATGTTTTGAAACCAAAATAATTATATTGGAAATC 13033 Query 78611 TCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAAT---ATCCAT 78667 ||| || |||| |||| || ||||| |||||| | ||| ||||| || | Sbjct 13034 TCTATCATAAACAATAGCACTATTTAAAACATCTTTATTTTTTTCTACAATTTGATAAAC 13093 Query 78668 GACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAA 78727 | || | | ||| || |||||| || |||||||| ||||||||| | |||| Sbjct 13094 GTCATCACT---AATCATTGGAGATTTTAATCCATTTTTTTCATTAACATAAAAATATAA 13150 Query 78728 ATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTAT 78787 |||| || || | | |||| ||||||| |||| || |||| |||||| | ||| || Sbjct 13151 ATCTGAAATGACTTGAGAAAATTGTTTTTTAGTTTGTTTATGTAAATTAGAAATAGCAAT 13210 Query 78788 TCTTGCAGCTAGAATAGCATAATCAGGATG--TTGT-GTAGTACAAGTGGCTGCTATTTC 78844 ||||||||| | |||||||||||||||| | || || || || || | |||| Sbjct 13211 TCTTGCAGCCAATGTAGCATAATCAGGATGAATAGTGGTCATATAA---GCACATGTTTC 13267 Query 78845 TGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTT 78904 || || ||| |||| || || ||||| || || || | ||| | || |||| || Sbjct 13268 AGCAGCCAAATTATCCAATTCAATAGTAGTAACACCTTCATAAACACCAGATATAA--TT 13325 Query 78905 CATGGCG--ATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTTCTA 78962 | | | | || |||||||| | | | | | || |||||||||||| | | Sbjct 13326 CTTTGTGTAATAGAAACAGGATCAATATGGTTTGGATCTAAACCATAACATAATCTAGCA 13385 Query 78963 ATACGAGATGTGATTTTATCAAAT 78986 || | ||| ||||||||||||||| Sbjct 13386 ATTCTAGAAGTGATTTTATCAAAT 13409 >seq140 Length=127049 Score = 352 bits (390), Expect = 4e-92 Identities = 623/897 (69%), Gaps = 12/897 (1%) Strand=Plus/Plus Query 47837 CATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTC 47896 |||||| || ||||||||| ||| || | ||| || || ||||| ||||| ||| | Sbjct 6238 CATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGC 6297 Query 47897 CAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCC 47956 ||||| |||||||||||||||||||||||||| |||||||| ||||| | || Sbjct 6298 TAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCATTACC 6357 Query 47957 TAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATT 48016 |||| | | | |||||| ||||| ||||| | |||| ||||||| | || ||| Sbjct 6358 TAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATT 6417 Query 48017 CATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGC 48076 ||| |||| | ||| || | || || || | | || ||| |||| ||||| Sbjct 6418 CATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACAGC 6477 Query 48077 ATCCACTATTATCGATGTTACCGTTTCCTCACT-TGGTGGATACAACAAATGTTTAAACA 48135 || | || || | | | || || | | |||| || |||||||| ||| | Sbjct 6478 TTC-AGTAATAATTCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAATA 6536 Query 48136 TTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATG 48195 || ||||||||||||| || || ||||||||||||| ||| ||||| || ||||| | Sbjct 6537 ATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAAG 6596 Query 48196 TGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAA 48255 | | ||| ||||| | || ||| || | |||||| ||||| || || || || |||| Sbjct 6597 TCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAAA 6656 Query 48256 AGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA-ACTGG--CTTCGT 48312 |||| | ||||| || || |||||||| | ||| || | | | || |||| | Sbjct 6657 AGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCAT 6716 Query 48313 TGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTT-ACACAAGGCATTGTTTCTATA 48371 || ||||| | ||||| ||||| || |||||| | || || ||||| ||| Sbjct 6717 CTTGAATCCATCTAATAGCCCATTCAGCTTT-TTCTTTGATTTGTGGAATAGTTTCAATA 6775 Query 48372 GCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTA 48431 ||||| || | || | |||| || |||||| | |||||||| || ||||| | Sbjct 6776 GCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGCGAA 6835 Query 48432 TACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCT 48491 || |||| || |||||||| || || || || |||||||||||| | |||||| Sbjct 6836 TATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTCT 6895 Query 48492 GTGATCTGTACCTCCGTAC-AAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACT 48550 | ||||| || || | || |||| | || ||||||||||||| || || ||||| Sbjct 6896 GGAATCTGCACTTCAGCACTGAAATTCTCCA-CCAAATTCTCATTGACAATCCCATCTGA 6954 Query 48551 AGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGT---TT 48607 |||||| ||||||||||| || |||| ||| || |||| || | ||| | || Sbjct 6955 AGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTATT 7014 Query 48608 ATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTC 48667 ||||||||| | ||||||||| || | ||| | |||||| || ||||||||||| || || Sbjct 7015 ATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGCTTC 7074 Query 48668 TGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCT 48724 || ||| || | ||| || ||| ||||| |||||| || | ||||||||| Sbjct 7075 AGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATCT 7131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694666151575200