Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq230 168 1e-36
seq182 158 3e-33
seq70 147 5e-30
>seq230
Length=21327
Score = 168 bits (186), Expect = 1e-36
Identities = 147/183 (80%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||||||||| ||||||||||||| | || | ||||| || | |||||| || |||||
Sbjct 13630 TTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAA 13571
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | |||||||||| |||||||| || ||||||||||| || ||||| ||| |
Sbjct 13570 GATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGGATTTTGGCTTTGACGTT 13511
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|||||| ||||| || | ||||||||| |||||||| |||||||| || || || || ||
Sbjct 13510 ATCGATGGTGTCGGAGGATTCGACTTCTAGAGTGATAGTCTTACCAGTTAAGGTTTTGAC 13451
Query 283088 GAA 283090
||
Sbjct 13450 AAA 13448
>seq182
Length=55006
Score = 158 bits (174), Expect = 3e-33
Identities = 152/195 (78%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||||||||| ||||||||||||| | || | ||||| || | |||||| || |||||
Sbjct 1857 TTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAA 1798
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | |||||||||| || ||||| || ||||||||||| || ||||| || |
Sbjct 1797 GATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTCTTGGATTTTGGCTTTAACATT 1738
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| || | ||||||||| | || || || ||||| |||||||| |||||
Sbjct 1737 GTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAAC 1678
Query 283088 GAATATCTGCATTTT 283102
||| || ||||| ||
Sbjct 1677 GAAAATTTGCATCTT 1663
>seq70
Length=20209
Score = 147 bits (162), Expect = 5e-30
Identities = 149/194 (77%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| ||||||||||||||||| | | ||| | ||| || || | ||||| || |||||
Sbjct 19614 TCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAA 19673
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
||||| | |||||||||| ||||| || || ||||| |||||||| | || ||| |
Sbjct 19674 ATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTGTCCTGGATCTTGGACTTGACGTTG 19733
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
||||| ||||| || | ||| ||||| | |||||| || || || |||||||| |||||
Sbjct 19734 TCGATGGTGTCTGAGGATTCAACTTCCAAAGTGATGGTTTTCCCAGTCAAAGTTTTAACA 19793
Query 283089 AATATCTGCATTTT 283102
|| || ||||||||
Sbjct 19794 AAAATTTGCATTTT 19807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046735109539470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |