Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq230 168 1e-36 seq182 158 3e-33 seq70 147 5e-30 >seq230 Length=21327 Score = 168 bits (186), Expect = 1e-36 Identities = 147/183 (80%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||||||||| ||||||||||||| | || | ||||| || | |||||| || ||||| Sbjct 13630 TTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAA 13571 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | |||||||||| |||||||| || ||||||||||| || ||||| ||| | Sbjct 13570 GATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGGATTTTGGCTTTGACGTT 13511 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 |||||| ||||| || | ||||||||| |||||||| |||||||| || || || || || Sbjct 13510 ATCGATGGTGTCGGAGGATTCGACTTCTAGAGTGATAGTCTTACCAGTTAAGGTTTTGAC 13451 Query 283088 GAA 283090 || Sbjct 13450 AAA 13448 >seq182 Length=55006 Score = 158 bits (174), Expect = 3e-33 Identities = 152/195 (78%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||||||||| ||||||||||||| | || | ||||| || | |||||| || ||||| Sbjct 1857 TTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAA 1798 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | |||||||||| || ||||| || ||||||||||| || ||||| || | Sbjct 1797 GATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTCTTGGATTTTGGCTTTAACATT 1738 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| || | ||||||||| | || || || ||||| |||||||| ||||| Sbjct 1737 GTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAAC 1678 Query 283088 GAATATCTGCATTTT 283102 ||| || ||||| || Sbjct 1677 GAAAATTTGCATCTT 1663 >seq70 Length=20209 Score = 147 bits (162), Expect = 5e-30 Identities = 149/194 (77%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||||||||||||||| | | ||| | ||| || || | ||||| || ||||| Sbjct 19614 TCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAA 19673 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | |||||||||| ||||| || || ||||| |||||||| | || ||| | Sbjct 19674 ATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTGTCCTGGATCTTGGACTTGACGTTG 19733 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| || | ||| ||||| | |||||| || || || |||||||| ||||| Sbjct 19734 TCGATGGTGTCTGAGGATTCAACTTCCAAAGTGATGGTTTTCCCAGTCAAAGTTTTAACA 19793 Query 283089 AATATCTGCATTTT 283102 || || |||||||| Sbjct 19794 AAAATTTGCATTTT 19807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046735109539470