Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq140 342 5e-89 >seq140 Length=127049 Score = 342 bits (378), Expect = 5e-89 Identities = 618/897 (69%), Gaps = 9/897 (1%) Strand=Plus/Plus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264 ||||||||| ||||||||| || ||| | | |||| || ||||| || ||||| | Sbjct 6238 CATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGC 6297 Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGA 23324 |||||| |||||||||||||||||||||||||| ||| |||||| | | ||| ||| | Sbjct 6298 TAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATA-ATATTTTT-CATTA 6355 Query 23325 --TAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAG 23382 |||| | || | ||||| || |||||||||| ||||||| |||||| || Sbjct 6356 CCTAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCA 6415 Query 23383 TTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACA 23442 || ||||||| || || || | ||||| | || || ||||||||| |||||| Sbjct 6416 TTCATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACA 6475 Query 23443 GCATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAAC 23502 || || |||| ||| || | || | | ||| || || |||| | ||| Sbjct 6476 GCTTCAGTAATAATTCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAAT 6535 Query 23503 AATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAAT 23562 |||| ||||||||||||| ||||| |||||||| |||| |||||||||||| ||||| Sbjct 6536 AATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAA 6595 Query 23563 GTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAA 23622 || || |||||||| || || ||| || | |||||| |||||||||||||| |||||| Sbjct 6596 GTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAA 6655 Query 23623 AAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAA 23682 ||||||| ||| |||||||| ||||| ||||| | | | | ||||| ||||| | | Sbjct 6656 AAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCA 6715 Query 23683 TCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATT 23742 || ||||||| | | | ||| | ||| || ||| | ||| |||||||| Sbjct 6716 TCTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATA 6775 Query 23743 GCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTA 23802 || || || | || |||||| |||| | ||||| ||||| || | | | Sbjct 6776 GCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGCGAA 6835 Query 23803 TACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCA 23862 || ||||| ||| |||||||| || || || ||||| ||||||||| ||||||| Sbjct 6836 TATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTCT 6895 Query 23863 GACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTA 23922 | | || || ||| | || | | | ||||| || || ||||| ||||| | Sbjct 6896 GGAATCTGCACTTCAGCACTGAAATTCTCCACCAAATTCTCATTGACAATCCCATCTGAA 6955 Query 23923 GCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCAGTTGATAAT-TT 23978 ||||| || || || | ||| | || ||| ||||||| ||| || || | || Sbjct 6956 GCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCA-TTCATTCTATT 7014 Query 23979 TTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAA 24038 ||||| || | |||||||| || | ||| | ||| || | |||||||| || Sbjct 7015 ATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGCTTC 7074 Query 24039 GGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATCT 24095 ||||| || || | |||| || |||| | || |||||||| | || ||||| Sbjct 7075 AGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATCT 7131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521486011827000