Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq140 342 5e-89
>seq140
Length=127049
Score = 342 bits (378), Expect = 5e-89
Identities = 618/897 (69%), Gaps = 9/897 (1%)
Strand=Plus/Plus
Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264
||||||||| ||||||||| || ||| | | |||| || ||||| || ||||| |
Sbjct 6238 CATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGC 6297
Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGA 23324
|||||| |||||||||||||||||||||||||| ||| |||||| | | ||| ||| |
Sbjct 6298 TAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATA-ATATTTTT-CATTA 6355
Query 23325 --TAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAG 23382
|||| | || | ||||| || |||||||||| ||||||| |||||| ||
Sbjct 6356 CCTAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCA 6415
Query 23383 TTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACA 23442
|| ||||||| || || || | ||||| | || || ||||||||| ||||||
Sbjct 6416 TTCATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACA 6475
Query 23443 GCATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAAC 23502
|| || |||| ||| || | || | | ||| || || |||| | |||
Sbjct 6476 GCTTCAGTAATAATTCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAAT 6535
Query 23503 AATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAAT 23562
|||| ||||||||||||| ||||| |||||||| |||| |||||||||||| |||||
Sbjct 6536 AATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAA 6595
Query 23563 GTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAA 23622
|| || |||||||| || || ||| || | |||||| |||||||||||||| ||||||
Sbjct 6596 GTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAA 6655
Query 23623 AAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAA 23682
||||||| ||| |||||||| ||||| ||||| | | | | ||||| ||||| | |
Sbjct 6656 AAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCA 6715
Query 23683 TCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATT 23742
|| ||||||| | | | ||| | ||| || ||| | ||| ||||||||
Sbjct 6716 TCTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATA 6775
Query 23743 GCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTA 23802
|| || || | || |||||| |||| | ||||| ||||| || | | |
Sbjct 6776 GCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGCGAA 6835
Query 23803 TACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCA 23862
|| ||||| ||| |||||||| || || || ||||| ||||||||| |||||||
Sbjct 6836 TATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTCT 6895
Query 23863 GACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTA 23922
| | || || ||| | || | | | ||||| || || ||||| ||||| |
Sbjct 6896 GGAATCTGCACTTCAGCACTGAAATTCTCCACCAAATTCTCATTGACAATCCCATCTGAA 6955
Query 23923 GCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCAGTTGATAAT-TT 23978
||||| || || || | ||| | || ||| ||||||| ||| || || | ||
Sbjct 6956 GCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCA-TTCATTCTATT 7014
Query 23979 TTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAA 24038
||||| || | |||||||| || | ||| | ||| || | |||||||| ||
Sbjct 7015 ATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGCTTC 7074
Query 24039 GGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATCT 24095
||||| || || | |||| || |||| | || |||||||| | || |||||
Sbjct 7075 AGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATCT 7131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521486011827000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |