Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq70 98.7 7e-16 seq182 91.5 1e-13 >seq70 Length=20209 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-C 44169 || ||||||| |||||| |||| ||| || || |||||||||||||||||| |||| | Sbjct 19578 CCACCTCTCAATCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGAC 19637 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 | | || |||| |||| ||| || || ||||| ||||| | || || || | || Sbjct 19638 AACGTTCTGC-CGTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGG 19696 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCAC 44289 | ||||| || ||| ||||| ||| | | | |||||||| | |||||| || Sbjct 19697 AATCCCTTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAAC 19756 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || || || || || || | || || || || |||||||| Sbjct 19757 TTCCAAAGTGATGGTTTTCCCAGTCAAAGTTTTAACAAAAATTTGCAT 19804 >seq182 Length=55006 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| |||||| |||| |||||| ||| || ||||| |||||||| || | Sbjct 1892 CCACCTCTCAATCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGAC 1833 Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | ||| | | || |||| || || || ||||||||||| | || || || | | Sbjct 1832 AAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 1775 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCC 44287 | | |||||| || || || || |||| || || | |||||||| | |||||| Sbjct 1774 GGATACCTTCTTTGTCTTGGAT-TTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCG 1716 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||| ||||| || || || || | || || ||||| |||||||| Sbjct 1715 ACTTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCAT 1666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989061848185