Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq167 102 1e-16 seq124 100 4e-16 >seq167 Length=9363 Score = 102 bits (112), Expect = 1e-16 Identities = 132/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 63718 GTTAAAATAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTT 63777 |||||| | | | | ||| || | ||| | || |||| ||||| || ||||| || Sbjct 3094 GTTAAAGTTAGAGTTAGAACTACCAAAGTGCCGCAAATTGGTGACAAGTTTGCCTCCAG- 3036 Query 63778 ACA-GCTCAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAA 63836 ||| | |||||||||||| |||||| | ||| || |||||||||||| ||||| Sbjct 3035 ACACGGTCAAAAAGGTACCATTGGTATCACATATAGAAGAGAAGATATGCCATTTACGGC 2976 Query 63837 AGACGGTATCGTACCCGATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGACCGT 63896 ||| ||||| || || ||| | ||||||| ||||||||| |||| ||||||||| || Sbjct 2975 AGAAGGTATTGTTCCTGATTTGATCATCAACCCACACGCTATTCCATCTCGTATGACTGT 2916 >seq124 Length=28590 Score = 100 bits (110), Expect = 4e-16 Identities = 299/456 (66%), Gaps = 29/456 (6%) Strand=Plus/Minus Query 50464 ACAGAAACAAAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGC 50523 |||||| |||| ||| | || |||||||| || ||||| ||||||||||||||||| Sbjct 22303 ACAGAAGAGAAGGTGATCTTGGTCCTGTTTATGGGTTTCAGTGGAGACATTTTGGAGCAG 22244 Query 50524 GTTACATAAATTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACT-GCAAAAA--A 50580 |||| | || |||| || || || || || ||| |||||||| || || | Sbjct 22243 AATACAAGACATGTGACGACAACTATGATGGCCAGGGCTACGATCAACTCGCTGAAGTCA 22184 Query 50581 T-TATAACGACGTTGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAAT 50639 | ||||| || ||||| ||||| |||| | | ||| | | | || |||||| Sbjct 22183 TATATAA--AC--TGAAACATAACCCTTACGACAGAAGAATTATCTTAAGTGCTTGGAAT 22128 Query 50640 CCAACCGATATAGATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATGCC 50699 || | ||| | | ||| | ||| || || |||||||| || |||||||||||| Sbjct 22127 CCTCCAGATTTCAAAAAAATGGCTTTGCCACCTTGTCATGTCTTCAGTCAATTTTATGTG 22068 Query 50700 AC---------------AGACAAT-GTTTTATCCTGTCAAT-GTTAT----CAAAGATCA 50738 | || | | || || || || ||| | |||||||| Sbjct 22067 AGTTTTCCTAAGGAGGAAGGCGCTCGTCCTAAACTTTCGTGCGTTCTATACCAAAGATCC 22008 Query 50739 GCTGATATGGGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACGCTTTATTAACGTATTTG 50798 || ||||||||||| ||||| |||||| | || || || || || || || | || Sbjct 22007 TGCGACATGGGTTTAGGAGTTCCATTCAACATCGCATCCTATGCATTGTTGACCAAGATG 21948 Query 50799 ATCGCTCAAGCCGTCGATATGAAACCGGGAGAATTTATTCATACGTTAGGAGACGCTCAT 50858 || || ||| |||||| | || || |||||||| || || || || |||||||| Sbjct 21947 ATTGCCAAAGTTTGTGATATGGATCCTGGTGAATTTATCCACACTTTGGGGGACGCTCAC 21888 Query 50859 ATTTACCTCGATCACGTCGATGCTTTAAAGGAGCAA 50894 |||| |||||||| || ||||| || || ||| Sbjct 21887 GTTTATAAAGATCACGTTGACGCTTTGAAAGAACAA 21852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667072656775800