Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq627 199 4e-46 >seq627 Length=179744 Score = 199 bits (220), Expect = 4e-46 Identities = 612/928 (66%), Gaps = 35/928 (4%) Strand=Plus/Minus Query 16642 TGTGTTATCTTGTTTATGA-ACAACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGA 16700 ||| ||| |||| || || | |||||| | |||| ||||| ||| | |||||| | Sbjct 173565 TGTATTA-CTTGATTTTGCCATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAA 173507 Query 16701 AAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTAGTAGC-T 16759 | || || ||||| || ||| || ||||| ||||| |||||||| ||||| | | | | Sbjct 173506 AGAAATTGGTTTTACCTGCTAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACAT 173447 Query 16760 GAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATAT 16819 | |||||||| | |||| | | | | | ||||||||| || |||||||| | |||| Sbjct 173446 TATAATATTTTTCATTACCTAA-TGCAACCAATAATCTATCAGCAACAAATTCAACATAT 173388 Query 16820 TGGCACATTAATTC-GCAGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAA- 16877 || ||| ||| | ||| ||||| |||| | | || || | || || |||||| Sbjct 173387 TGATTCATCAATGCAGCA-TTCATACCTAATAAAGAAACAGGCAATGCATCT-TCAAAAT 173330 Query 16878 ATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCAACTCGTTCCTCGGAC--GG 16935 ||| || || ||| ||| ||||| ||||||| || || | || | ||| || Sbjct 173329 ATCTTTTTTCAATAGAAACAGCTTCAGTAATAATTCTTTCAGCGATTT--TTGGATCTGG 173272 Query 16936 TGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCT 16995 | ||| || | ||||| ||| | |||||||| ||||| |||| || || ||||| Sbjct 173271 TTTATTTTCCAAATGTTGAAATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCT 173212 Query 16996 GCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAA 17055 | || | ||| || ||||| ||||| || |||||| || ||||||||||||||| Sbjct 173211 ACAAATCAATTCATTTGAAAAAGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAA 173152 Query 17056 TATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCG 17115 || || || || || || |||||||| | ||| || || | ||||| || | |||| Sbjct 173151 AATTGCAGCAAATGAACCGGAAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCT 173092 Query 17116 TTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTT----TTT 17171 ||| || | || |||| | |||||||| | |||| || |||| ||| Sbjct 173091 TTCAGCAAATAATGCATCTTCATCTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTT 173032 Query 17172 GCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGA 17231 | ||| || | || ||||| || || || || || || |||| | | | || Sbjct 173031 GATTTGTGGA----ATAGTTTCAATAGCATTGAACAAGAATTCACTTTCTTTTGGATCTT 172976 Query 17232 TTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCT 17291 | ||||| |||||||| | || || |||| || || || ||||| || | Sbjct 172975 TGATATAAGTATCGATCAAAAGCGAATATGTTTCACTATGGATATTTTCCATCATGATTT 172916 Query 17292 GAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTC--CACGTAGAATCGTTCCGC 17349 | || |||||||| ||| ||||| | || || ||||| ||| | | || ||| | Sbjct 172915 GGAACCCGTAAAAACATTTAGCTTCTGGAATCTGCACTTCAGCACTGAAATTC--TCCAC 172858 Query 17350 TAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATA-TATGCTTAATGA 17408 | ||| || || || || || || || |||||||| || || | | | | |||||| Sbjct 172857 CAAATTCTCATTGACAATCCCATCTGAAGCAGCGAAAAATGCTAAAACTCTAC-TAATGA 172799 Query 17409 AATAT------TTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATAT 17462 || || ||||| | | | || | |||||| | | ||||||||| | || Sbjct 172798 AAAATCTTTCATTTTCATTCATTCTATTA---TTCCAGTCGTGGATATCTTTGGAAAGAT 172742 Query 17463 CCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCAT 17522 | | |||||| | |||||||| ||| | || ||| || | ||| || |||| Sbjct 172741 CGATTTCTTCTGCAGTCCAAAATGAAGCTTCAGCACGTTTGTAAGCTTGCCAGATTTCAT 172682 Query 17523 TGTATTGTATGGGGAATACAACATATCT 17550 ||||| || || || | |||| |||| Sbjct 172681 GGTATTTGATTGGAAACAAAACAAATCT 172654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517540806233880