Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq627 228 8e-55 >seq627 Length=179744 Score = 228 bits (252), Expect = 8e-55 Identities = 592/888 (67%), Gaps = 21/888 (2%) Strand=Plus/Minus Query 15901 AACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAA 15960 |||||| | |||| |||||| ||| | |||||| ||||| || ||||| || |||| Sbjct 173544 AACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGCTAA 173485 Query 15961 AGATATATTTTCCATAAAATCAAAGGGATTAGTAGC-TGAAAATATCTTAGAGTACCCCA 16019 || |||||||||||||||||||| ||||| | | | | | ||||| || | |||| | Sbjct 173484 TGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCATTACCTAA 173425 Query 16020 GTTCCGTAACTAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAA 16079 | | | ||||||||| || |||||||| | ||||||| ||| || | ||| | Sbjct 173424 -TGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATTCA 173366 Query 16080 TTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTT 16139 | |||| | || || | || | | ||| || || ||| || ||| |||| Sbjct 173365 TACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACAGCTT 173306 Query 16140 CTTTAATGATATCGGTG-GCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATT 16198 | |||| || || | || | || | ||| ||| | | |||| ||| | | Sbjct 173305 CAGTAATAAT-TCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAATAAT 173247 Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 ||||| || || || ||||| ||||| ||||| | || | ||| || |||||||| Sbjct 173246 AGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTC 173187 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318 || |||||||| || |||||||||||| || || ||||||||||| || |||||| Sbjct 173186 AAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAAAAG 173127 Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTA 16378 || | ||| ||||||| ||||| || | |||| ||| || | ||||||| || Sbjct 173126 AAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCATCT 173067 Query 16379 CGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCC 16438 |||||||| | ||||||| ||||||| ||| || || ||||| || || Sbjct 173066 TGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATAGCA 173007 Query 16439 TTAAACA--ATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTG- 16495 || |||| | ||| |||| | || ||| | ||||| ||||| |||| ||| | Sbjct 173006 TTGAACAAGAATTCACTTTCTTTTG--GATCTTTGATATAAGTATCGATCA--AAAGCGA 172951 Query 16496 -TACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTC 16554 || |||| || || || || || || || || || || || ||| ||| || Sbjct 172950 ATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTC 172891 Query 16555 CGCTATTTGTACTTC--CACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCA 16612 | || || ||||| ||| ||| || ||| ||| |||||||| || || || || Sbjct 172890 TGGAATCTGCACTTCAGCACTGAAATTC--TCCACCAAATTCTCATTGACAATCCCATCT 172833 Query 16613 CTTGCAGCAAAAAACGCCAATA-TGTGCTTAATGAAATATTTTTC---GTCAGATGTAAG 16668 ||||| ||||| || || | | | | |||||||| || |||| ||| | Sbjct 172832 GAAGCAGCGAAAAATGCTAAAACTCTAC-TAATGAAAAATCTTTCATTTTCATTCATTCT 172774 Query 16669 AATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGC 16728 | ||| ||| || | | ||||||||| | ||| | |||||||| |||||||| ||| Sbjct 172773 ATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGC 172714 Query 16729 CACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAA 16776 | || ||| || || ||| || |||| ||||| || ||||| Sbjct 172713 TTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAA 172666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511409663024120