Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq627 228 8e-55
>seq627
Length=179744
Score = 228 bits (252), Expect = 8e-55
Identities = 592/888 (67%), Gaps = 21/888 (2%)
Strand=Plus/Minus
Query 15901 AACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAA 15960
|||||| | |||| |||||| ||| | |||||| ||||| || ||||| || ||||
Sbjct 173544 AACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGCTAA 173485
Query 15961 AGATATATTTTCCATAAAATCAAAGGGATTAGTAGC-TGAAAATATCTTAGAGTACCCCA 16019
|| |||||||||||||||||||| ||||| | | | | | ||||| || | |||| |
Sbjct 173484 TGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCATTACCTAA 173425
Query 16020 GTTCCGTAACTAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAA 16079
| | | ||||||||| || |||||||| | ||||||| ||| || | ||| |
Sbjct 173424 -TGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATTCA 173366
Query 16080 TTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTT 16139
| |||| | || || | || | | ||| || || ||| || ||| ||||
Sbjct 173365 TACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACAGCTT 173306
Query 16140 CTTTAATGATATCGGTG-GCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATT 16198
| |||| || || | || | || | ||| ||| | | |||| ||| | |
Sbjct 173305 CAGTAATAAT-TCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAATAAT 173247
Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258
||||| || || || ||||| ||||| ||||| | || | ||| || ||||||||
Sbjct 173246 AGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTC 173187
Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318
|| |||||||| || |||||||||||| || || ||||||||||| || ||||||
Sbjct 173186 AAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAAAAG 173127
Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTA 16378
|| | ||| ||||||| ||||| || | |||| ||| || | ||||||| ||
Sbjct 173126 AAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCATCT 173067
Query 16379 CGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCC 16438
|||||||| | ||||||| ||||||| ||| || || ||||| || ||
Sbjct 173066 TGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATAGCA 173007
Query 16439 TTAAACA--ATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTG- 16495
|| |||| | ||| |||| | || ||| | ||||| ||||| |||| ||| |
Sbjct 173006 TTGAACAAGAATTCACTTTCTTTTG--GATCTTTGATATAAGTATCGATCA--AAAGCGA 172951
Query 16496 -TACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTC 16554
|| |||| || || || || || || || || || || || ||| ||| ||
Sbjct 172950 ATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTC 172891
Query 16555 CGCTATTTGTACTTC--CACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCA 16612
| || || ||||| ||| ||| || ||| ||| |||||||| || || || ||
Sbjct 172890 TGGAATCTGCACTTCAGCACTGAAATTC--TCCACCAAATTCTCATTGACAATCCCATCT 172833
Query 16613 CTTGCAGCAAAAAACGCCAATA-TGTGCTTAATGAAATATTTTTC---GTCAGATGTAAG 16668
||||| ||||| || || | | | | |||||||| || |||| ||| |
Sbjct 172832 GAAGCAGCGAAAAATGCTAAAACTCTAC-TAATGAAAAATCTTTCATTTTCATTCATTCT 172774
Query 16669 AATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGC 16728
| ||| ||| || | | ||||||||| | ||| | |||||||| |||||||| |||
Sbjct 172773 ATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGC 172714
Query 16729 CACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAA 16776
| || ||| || || ||| || |||| ||||| || |||||
Sbjct 172713 TTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAA 172666
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511409663024120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |