Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq664 385 6e-102 seq627 300 2e-76 >seq664 Length=41649 Score = 385 bits (426), Expect = 6e-102 Identities = 1457/2255 (65%), Gaps = 81/2255 (4%) Strand=Plus/Minus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 || || || |||| ||| || || | || || | | |||||||| || ||||| | | Sbjct 34915 GTAAACTGGATGGCAGCAGAAGCAGCTTGGGTTCTCAAGTAGTACATCCCTGTTTTCAAA 34856 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGA-ATAACTCGGATC-TGCTA 52925 || | ||| ||||| |||||||| || ||||| || | || | || | Sbjct 34855 CCTTTAGACCACCCGTAGAAATGCATGGAGGTCAGTTTCCCCATTGTTGGGGCCATG--A 34798 Query 52926 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 52985 | |||||||| | ||| ||| |||||| ||||| || ||||| |||||||| | | Sbjct 34797 TGTGGATATTTAGAGAGTGAGATTGATCAATGAAAGCGGATCTGTCAGCAGCCATGTCGA 34738 Query 52986 TGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 53044 ||||||||||||| | | |||||||| ||||| || || || | ||| |||| ||| Sbjct 34737 TGATCGTCTTTTGAGACAATTCCCAAACTGTTTTGTACAAGTCTTTCAAT-TCTTGAGGA 34679 Query 53045 AGGTTTGTA---TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCA 53101 | ||||| | ||||| || || | | || || | || || |||| Sbjct 34678 ATGTTTGGCAAGTGTTGAATGGACCCGTTGTTGGCAATGATGTTTGATTTCATAGCATCG 34619 Query 53102 TTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 53160 ||||| ||| | || ||| |||| || | | ||||| || | ||| ||||| Sbjct 34618 TTCCA-AATGCCCAAATCAACCAAATCTCTTAGCAAGTATGGATTGACAATTTGGAATTC 34560 Query 53161 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATT 53220 |||||||| ||| | || ||| || || || | ||||| | | | || || | Sbjct 34559 ACCAGACAACGTTCTTCTAGAGTACATGTTTGAAGTGAATGGTTCGAAACATTCGTTGTA 34500 Query 53221 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 53280 ||||| ||||| | |||||||| || ||||| || |||| || || ||||| | Sbjct 34499 ACCCAAGATTTGCGATGTTGATGCTGTTGGCATTGGAGCCAATAACAATGAGTTTCTCAA 34440 Query 53281 ACC-GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 53339 || || | | ||||| ||| | | || |||||| | ||| | ||| | || | Sbjct 34439 TCCAGTTTCCACA-ATTTTTTCTCTCAAAGATTCCCATTCCCACAAATCAGTTGGAGCTC 34381 Query 53340 CNNNNNNNNNNNNNNNTTGTAGAATACC--GTTA--CTGGCGTACGATCCTACATATGTA 53395 ||| | || ||| || | |||| | || | | | || Sbjct 34380 TATCCCACATGTCAAATTGCAAAACACCTTGTGAAGCTGGTGAACCTTGGAA-AGAT--- 34325 Query 53396 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 53455 | |||||| ||||| | | | || | ||| | || |||||| | | || | Sbjct 34324 TGGTATGGACCTTCTTCCACGGCCATTTCGTTTGAAGATTCCAATGCAGCATGGTACAAT 34265 Query 53456 GTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAG 53515 |||||||| || | |||| || | || |||| | |||||||||| | || Sbjct 34264 GTTTCGAAAATTTGAATATTCAGTTGTTTGGCTTGTTCGGAATCAAATGGAATTCTCAAA 34205 Query 53516 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 53575 || ||||| | || || || ||||||||||||| | |||||||| |||||| |||| Sbjct 34204 AGCATAAAAGTATCAGCCAAACCTTGAACACCAAGGGCAATAGGTCTGTGTCTCATATTT 34145 Query 53576 GAGATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTT 53632 ||| || ||| ||| | ||| |||||||| | || || | | | || | ||| Sbjct 34144 GAGTTTCTTGCAGTTTCC---ACAGGGTAATAATTTCTGTCAATGACTCTGTTCAAATTT 34088 Query 53633 CTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---------TTGTCCA 53683 || ||| ||||| | ||||| | | ||| | |||||| | ||| ||| Sbjct 34087 CTTGTAATGACTTTTGCAACATCGTGTAATTTTTGGAAATCATAAGTTTGTTGTTGACCA 34028 Query 53684 TCTATTACAAACAT----------GTTCAATGCAATAGATGCCAGATTACAAACGGC--- 53730 ||| | |||||| | ||| |||||||| |||| ||||||||| || Sbjct 34027 TCTTCTG-AAACATTGATGAAAGCGGGCAAAGCAATAGAAGCCAAATTACAAACAGCAGT 33969 Query 53731 TACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGT 53790 | | || ||| || | ||||| | || ||| || | |||| | ||||| || Sbjct 33968 TTCGTCGTTA---TCTGAATATTCCACAATTTCACAACACAAATTAGATGATTTGATAGT 33912 Query 53791 TCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGT 53850 ||||||||||| ||||||| ||||||||||| ||||| || |||| ||| ||||| || Sbjct 33911 TCCTAAATTTTTTTGATTAGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGT 33852 Query 53851 ACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGA 53910 ||| |||||| | || | ||| | || || | ||| | | || |||| |||| Sbjct 33851 ACCTGTTTCAGTTTGTGCTTCCAAGATAGCATACCATAATTTTTGTGC-TTTA--ATAGT 33795 Query 53911 TTTG-TATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCA 53967 ||| || ||||| |||| | ||| | |||||| |||||| || | || | Sbjct 33794 TTTTCTACCTCTTCCTTCTGAAACATATCTATTGTACAATTTTTCAAAATCTGCACCATA 33735 Query 53968 AACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTT 54027 ||||| || || ||| |||| ||| | | ||| | ||| ||| | || || Sbjct 33734 AACATCACTTAAACCTGGAGCTTCACTTGGAGAAAACAATGTCCAATCTGAATTTTCTTT 33675 Query 54028 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 54087 ||| || |||||| | ||| |||| ||| | || ||| | |||||| | |||| Sbjct 33674 AACTTTTTGCATAAATAAATCTGGAACCCATAATGCAGGAAACAAATCTCTTGCTCTAAT 33615 Query 54088 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 54147 ||| || || || ||| || || ||| | || | | ||||||| |||||| || Sbjct 33614 TTCTTCTTTACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATGCCATGG 33555 Query 54148 TTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 54207 ||| || || | | | | | ||||| | ||| || || || ||||| | ||||| || Sbjct 33554 TTCTAAATAAAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTTGC 33495 Query 54208 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGA 54267 || ||||| ||||||| | ||||||||| | ||||| || | ||||| || || | Sbjct 33494 AGTATTATTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTCCCATTAGTACCTGC 33435 Query 54268 GATATAGCTTCCACTGGCACGAATATTACTAAT-TGATAGACCTATCCCCCCTGCCATTT 54326 ||||| || | | | ||||||| ||| ||| ||||| || || || || ||| Sbjct 33434 AATATAAGAACCGGTTGATCTAATATTATGAATATGA-AGACCAATACCACCAGCAGTTT 33376 Query 54327 TAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCA 54386 |||| || || || ||| |||||| |||||||| || || || || ||| || ||| Sbjct 33375 TAGAAATCAAAGCACATTCTTTTAAAGTATCATAAATACCATCAATGGAATCGTCTTTCA 33316 Query 54387 TGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAG 54446 | || || ||||| ||||||||| | | ||||| ||||| ||||| || | Sbjct 33315 TAGCAACAAGGAAACATGAAGACATTTGAGGTCTTGGTGTTCCAGCATTGAATAAAGTTG 33256 Query 54447 GAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTA 54506 |||| || || || || || | ||| | | ||| || || || | || || | Sbjct 33255 GAGATGCATGTGTGAAATATCTCAAAGACATCAAATTATAAGTTTCCAAGACTTTTTCAA 33196 Query 54507 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 54566 |||| | |||||| || || || || | ||| | || || |||||||||||| | | Sbjct 33195 TATCTGAACCATGAATCCCGACAGCAACTCTCATGATCAAATGTTGAGGTCTTTCAGCAA 33136 Query 54567 TCTTGTTGTTT-ATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 54625 | |||| || ||| | | || || ||| ||||||| ||||| ||||||||||| || Sbjct 33135 T-TTGTCCATTGATTCTTAATAAATACGATCTTTCCAATGTTTTGAAACCAAAATAATTA 33077 Query 54626 TATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACT 54685 ||| || |||| || |||| |||| | || | ||| |||| ||| | || Sbjct 33076 TATTGGAAATCTCTATCATAAACAATAGCACTATTTAAAACATCTTTATTTTTTT---CT 33020 Query 54686 ACATCCATGGTAATACTTGA-----AATAATCGGAGAATGTTTCCCATTTTTAGGATTGA 54740 ||| || ||| || | | ||| || ||||| | | |||||||| ||| | Sbjct 33019 ACA-ATTTGATAA-ACGTCATCACTAATCATTGGAGATTTTAATCCATTTTTTTCATTAA 32962 Query 54741 CATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGAT 54800 |||| | ||||||| || |||| | |||| ||||||| |||| ||| |||| || Sbjct 32961 CATAAAAATATAAATCTGAAATGACTTGAGAAAATTGTTTTTTAGTTTGTTTATGTAAAT 32902 Query 54801 TTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG--TTGT-GTAGTACAAG 54857 | || | || ||||| || || | | |||||||| ||||| | || || || || Sbjct 32901 TAGAAATAGCAATTCTTGCAGCCAATGTAGCATAATCAGGATGAATAGTGGTCATATAA- 32843 Query 54858 TGGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTC 54917 || | |||| || | || | | |||||||| | || || || || | ||| | | Sbjct 32842 --GCACATGTTTCAGCAGCCAAATTATCCAATTCAATAGTAGTAACACCTTCATAAACAC 32785 Query 54918 CTTGGATAA-CCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAA 54976 | |||| ||| | | || || |||||| ||||| | | | ||| |||||| Sbjct 32784 CAGATATAATTCTTTGT-GTAATAGAAACAGGATCAATATGGTTTGGATCTAAACCATAA 32726 Query 54977 CATAATTTTCTAATACGAGATGTGATTTTATCAAA 55011 |||||| | ||| | ||| |||||||||||||| Sbjct 32725 CATAATCTAGCAATTCTAGAAGTGATTTTATCAAA 32691 >seq627 Length=179744 Score = 300 bits (332), Expect = 2e-76 Identities = 612/900 (68%), Gaps = 18/900 (2%) Strand=Plus/Minus Query 23831 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 23890 |||||| || |||||| || ||| || | |||||| || ||||| ||||||||| | Sbjct 173547 CATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGC 173488 Query 23891 TAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCC 23950 |||||| ||||||||||| ||||| ||||||| | ||||||||| || |||| | | | Sbjct 173487 TAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATA-ATATTTTTCATTAC 173429 Query 23951 C-AATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAAT 24009 | ||| || | |||||||| || ||||| || | |||| ||||||| | || || Sbjct 173428 CTAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCAT 173369 Query 24010 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 24069 |||| |||| | ||| || | || | || | || || ||||||||| || | Sbjct 173368 TCATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACAG 173309 Query 24070 CGTCTGTTATAATAGATCTTACTGT--TTCTTCACTC-GGTGGATACAATAAATGTTTAA 24126 | || || ||||| |||| | | || || || ||| || ||||||| || Sbjct 173308 CTTCAGTAATAAT---TCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAA 173252 Query 24127 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 24186 | | | |||||| ||||| |||||| || || ||||||| ||| ||||| || |||| Sbjct 173251 ATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAA 173192 Query 24187 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAG 24246 | || | || ||||| | || || || | |||||| || | |||||||| || | Sbjct 173191 AAGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGG 173132 Query 24247 AAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGT 24306 ||||||||| ||||| || || ||||| || | | |||||| || | || | Sbjct 173131 AAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTT 173072 Query 24307 CATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTA 24363 ||| | ||||| | |||||| || || || | ||| | || || || || | Sbjct 173071 CATCTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAA 173012 Query 24364 TAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGAC 24423 ||||||| || | | | |||| || |||||| | ||| ||||| |||||||| Sbjct 173011 TAGCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGCG 172952 Query 24424 TATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCT 24483 ||| |||| ||| || ||||| || ||||| || ||||| |||||| |||| | Sbjct 172951 AATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTT 172892 Query 24484 CGGTAATCTGTACTTCTATAC--AAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTC 24541 | | |||||| ||||| || ||| || || | ||||| ||||| || || || || Sbjct 172891 CTGGAATCTGCACTTCAGCACTGAAATTC--TCCACCAAATTCTCATTGACAATCCCATC 172834 Query 24542 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT-- 24599 || || ||||| || || || | || ||| || |||| | | | | | Sbjct 172833 TGAAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCT 172774 Query 24600 -TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 24658 |||||||| || | ||||||||| || | ||| | |||||| | ||||||||||| || Sbjct 172773 ATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGC 172714 Query 24659 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 24718 || || ||| || | |||||| ||||| |||| |||||||| | ||||||||| Sbjct 172713 TTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATCT 172654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593716100653680