Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq671 172 4e-38
>seq671
Length=59753
Score = 172 bits (190), Expect = 4e-38
Identities = 346/509 (68%), Gaps = 33/509 (6%)
Strand=Plus/Plus
Query 97036 TGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATA 97095
|| ||| | | ||| |||| ||||| ||||| |||||| || || |||||||| |||
Sbjct 42777 TGTTCTTTCAAAGCGTCAACGTGATCTTTATAAACGTGAGCGTCCCCCAAAGTGTGGATA 42836
Query 97096 AATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTA 97155
||||| |||||| | | |||| || | ||| ||||| || || | | ||||
Sbjct 42837 AATTCACCAGGATCCATATCACAAACTTTGGCAATCATCTTGGTCAACAATGCATAGGAT 42896
Query 97156 GCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAA 97215
|| ||||| || || || |||| ||||| || |||||||| |||| || |||
Sbjct 42897 GCGATGTTGAATGGAACTCCTAAACCCATGTCGCAGGATCTTTGGTATAGAACGCACGAA 42956
Query 97216 AGCTTT---------CCATC------------ACACACATAAAACTGACTCAATACATGA 97254
|| || || || || ||||||||| ||||| || ||||||
Sbjct 42957 AGTTTAGGACGAGCGCCTTCCTCCTTAGGAAAACTCACATAAAATTGACTGAAGACATGA 43016
Query 97255 CAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTT 97314
|| || ||||| ||||||||| | |||| ||||||||||| | | ||||||
Sbjct 43017 CAAGGTGGCAAAGCCATTTTTTTGAAATCTGGAGGATTCCAAGCACTTAAGATAATTCTT 43076
Query 97315 CTATCGGTTGGGTT-TGT----GTGTATGGTATTAATTATCTGCTTTAATTGATCAACGC 97369
|| ||| ||||| ||| || ||| ||| | || | || | |||||| ||
Sbjct 43077 CTGTCGTAAGGGTTATGTTTCAGTTTATA-TATGACTT--CAGCA--AGTTGATCGTAGC 43131
Query 97370 CTTCTCCACCATAATTGTGCTTA-AGACCTTGATATTCTGCTCCAAAATGCCTCCATTGG 97428
| | ||| |||| |||| | | | |||| ||||||||||||||||| ||||| ||
Sbjct 43132 CCTGGCCATCATAGTTGTCGTCACATGTCTTG-TATTCTGCTCCAAAATGTCTCCACTGA 43190
Query 97429 AATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAA 97488
|| ||||||||||| ||||| || |||||| ||| |||| || |||||||| || | |
Sbjct 43191 AACCCATAAACAGGACCAAGATCACCTTCTCTTCTGTCACTTAAGCCAAGCTTGTCAAGA 43250
Query 97489 TAGGACCTAGATCCATTTGCATCCCAAAT 97517
|| || || |||||| | ||||||||
Sbjct 43251 TACTCTCTTGACCCATTTCCTTCCCAAAT 43279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346780868215370
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |