Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq631 84.2 3e-11
>seq631
Length=151218
Score = 84.2 bits (92), Expect = 3e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| ||||| || | ||| ||||| || | || ||||||||| || ||||| || | |
Sbjct 131631 CCACCTCTCAATCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGAC 131572
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
| || | |||| || | ||| |||||||| || || | || || ||||| | ||
Sbjct 131571 AATGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGA 131512
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCAC 43135
| | || |||||| ||| || |||| ||| | | | ||||| ||||| ||
Sbjct 131511 ATCCCTTCTTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCTGAGGATTCAAC 131453
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | ||||||||||| || || | ||||| ||||||||||||||
Sbjct 131452 TTCCAAAGTGATGGTTTTCCCAGTCAAAGTCTTCACAAAGATTTGCAT 131405
Score = 82.4 bits (90), Expect = 9e-11
Identities = 159/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| ||||| || | ||| ||||| || | || ||||||||| || ||||| || | |
Sbjct 131403 CCACCTCTCAATCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGAC 131344
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
| || | |||| || | ||| |||||||| || || | || || ||||| | ||
Sbjct 131343 AACGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGA 131284
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCAC 43135
| | || |||||| ||| || |||| ||| | | | ||||| ||||| ||
Sbjct 131283 ATCCCTTCTTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCTGAGGATTCAAC 131225
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTT 43187
|| | ||||||||||| || || | || || ||||| ||||||||||||
Sbjct 131224 TTCCAAGGTGATGGTTTTCCCAGTCAAAGTTTTAACAAAAATTTGCATTTTT 131173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571812303539480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |