Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq627 338 6e-88 >seq627 Length=179744 Score = 338 bits (374), Expect = 6e-88 Identities = 634/916 (69%), Gaps = 28/916 (3%) Strand=Plus/Minus Query 15926 TTTGACATAACTGACAT--TTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTT 15983 |||| |||||| || | ||||||||| ||| |||||| |||||||||||||| |||| Sbjct 173552 TTTGCCATAAC--ACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTT 173495 Query 15984 TTCCTTCTAATGAAATATTTTCCATAAAATCAAAAGGATTTTTTGAACA--ATAGTATTT 16041 | ||| |||||||||||||||||||||||||||| |||||| |||| ||| ||||| Sbjct 173494 TACCTGCTAATGAAATATTTTCCATAAAATCAAATGGATTTGA--AACATTATAATATTT 173437 Query 16042 ATCGCATCCCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAA 16101 || || ||| | | |||||||||||| || |||||||| | ||| || ||||| || Sbjct 173436 TTCATTACCTAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAA 173377 Query 16102 ATCACAGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAt-ttttttCTA 16160 || ||||| |||| ||| |||||| | ||| ||| | |||| || ||||||| | Sbjct 173376 TGCAGCATTCATACCTAATAAAGAAACAGGCAATGCATCT-TCAAAATATCTTTTTTCAA 173318 Query 16161 TATTAACCGCTTCAATGATTATATCTCTTACTACACTATTTAACGGA--GGGTTTAAT-- 16216 || ||| |||||| | || || |||| | | | ||| ||| |||||| | Sbjct 173317 TAGAAACAGCTTCAGTAATAAT---TCTTTCAGCGATTTTT---GGATCTGGTTTATTTT 173264 Query 16217 --AAGTGTTTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTA 16274 || |||| ||| | || ||| ||||||||| || | ||||| || |||| || | Sbjct 173263 CCAAATGTTGAAATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCA 173204 Query 16275 ACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGG 16334 | || |||||||| || | ||||||||| | || ||| || | |||||| || || | Sbjct 173203 ATTCATTTGAAAAAGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAG 173144 Query 16335 CAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGT 16394 |||||||||| |||||||| | ||||||||| || |||||||| ||||||| ||| | Sbjct 173143 CAAATGAACCGGAAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAA 173084 Query 16395 ACGTTCTAtttttactttctatccattttttagcccaatttgctttttgtttAACACAGT 16454 | | || || | || |||||| | ||||||| | ||||||| ||| | Sbjct 173083 ATAATGCATCTTCATCTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTG 173024 Query 16455 TCATGTTCTCTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTAT 16514 || | || || ||||| || || | | ||||||| |||| |||||||||| Sbjct 173023 GAATAGTTTCAATAGCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTAT 172964 Query 16515 CTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAA 16574 | || | | ||| |||| ||| ||||| ||||| || || || || |||| Sbjct 172963 CGATCAAAAGCGAATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAA 172904 Query 16575 AGCATCTAGCTTCGGATATTTGTACTTCAG-AGTAAAACCTTTCTGCTAAGTTTTCGTTA 16633 | ||| ||||||| | || || ||||||| | | ||| | || | || || || || Sbjct 172903 AACATTTAGCTTCTGGAATCTGCACTTCAGCACTGAAA-TTCTCCACCAAATTCTCATTG 172845 Query 16634 ACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTA 16693 || || ||||| ||| || ||||| || | | |||| ||| | |||| || Sbjct 172844 ACAATCCCATCTGAAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTT 172785 Query 16694 TC--TGAAAGTTTTA-ACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTC 16750 || | | | ||| |||||| | |||||| || | ||||| |||||| ||||| Sbjct 172784 TCATTCATTCTATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTC 172725 Query 16751 CAAAAAGAAGCAACAGCCTTTTTATACATTTTCCATATGTCTTCGTAAACAATAGGAAAC 16810 ||||| ||||| |||| ||| || || ||| || || | ||| || |||||| Sbjct 172724 CAAAATGAAGCTTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAAC 172665 Query 16811 ACAACATA-CTTATTT 16825 | |||| | ||| ||| Sbjct 172664 AAAACAAATCTTCTTT 172649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462507715982600