Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq671 104 2e-17
>seq671
Length=59753
Score = 104 bits (114), Expect = 2e-17
Identities = 343/532 (64%), Gaps = 25/532 (5%)
Strand=Plus/Minus
Query 20214 AGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGT 20273
||| || ||| | |||||||| ||||| ||||| ||||||||||||||||| |||||
Sbjct 43220 AGAAGGTGATCTTGGTCCTGTTTATGGGTTTCAGTGGAGACATTTTGGAGCAGAATA-CA 43162
Query 20274 TGACATG-AACACAAATTATTTTGGACAAGGAGTAGATCAA-TTACAAAATGTTATTAAT 20331
|||||| || || ||| ||| || || |||||| || | || || || ||
Sbjct 43161 AGACATGTGACGACAACTATGATGGCCAGGGCTACGATCAACTTGCTGAA-GTCATATAT 43103
Query 20332 TTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGAT 20391
| | ||| ||||| |||||||||||||||| ||| | || ||||| || ||||
Sbjct 43102 AAACTGAAACATAACCCTTACGACAGAAGAATTATCTTAAGTGCTTGGAATCCTCCAGAT 43043
Query 20392 GTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACG------TTGCT 20445
| |||||||||||| || |||||| | | | |||||||| | || ||
Sbjct 43042 TTCAAAAAAATGGCTTTGCCACCTTGTCATGTCTTCAGTCAATTTTATGTGAGTTTTCCT 42983
Query 20446 AA---------------TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490
|| | | || | ||||| | || ||| ||||| || |||
Sbjct 42982 AAGGAGGAAGGCGCTCGTCCTAAACTTTCGTGCGTTCTATACCAAAGATCCTGCGACATG 42923
Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550
|| | || ||||| ||||| || ||| ||||| || | || | |||||||| |
Sbjct 42922 GGTTTAGGAGTTCCATTCAACATCGCATCCTATGCATTGTTGACCAAGATGATTGCCAAA 42863
Query 20551 GTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTT 20610
||| ||| | | | ||||| || ||||||| | || ||||| || ||||
Sbjct 42862 GTTTGTGATATGGATCCTGGTGAATTTATCCACACTTTGGGGGACGCTCACGTTTATAAA 42803
Query 20611 AATCATATAGAACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTT 20670
|||| | || |||| ||| ||| || | || | ||| ||||| | |||
Sbjct 42802 GATCACGTTGACGCTTTGAAAGAACAAATACAAAGAGAGCCACGTAGTTTCCCTAAACTT 42743
Query 20671 CGCATTACTCGAACTGTTAAAGATATTAACGATTTTAAAGCTGATGATTTTG 20722
||| | ||| ||| ||||| ||| |||| || ||| ||| |||||||
Sbjct 42742 GTCATCAAGCGAGATGTGAAAGACATTGACGACTTCAAAATTGAAGATTTTG 42691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399180394994245
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |