Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq506 140 2e-28
seq631 105 5e-18
seq596 105 5e-18
>seq506
Length=5049
Score = 140 bits (154), Expect = 2e-28
Identities = 182/247 (74%), Gaps = 5/247 (2%)
Strand=Plus/Minus
Query 18085 TTTCTTTTTGTTATC--CTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTG 18142
||||||||| ||| | | || | | ||| | |||| |||||| || |||||||||||
Sbjct 1915 TTTCTTTTT-TTACCACCACCTCTCAATCTCAAAACCAAGTGAAGGGTGGATTCTTTTTG 1857
Query 18143 AATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCT 18202
|||||||||||| | || ||| ||| ||||||||||||||| || ||| |||| | |||
Sbjct 1856 AATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCT 1797
Query 18203 TTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTG-CAACAG 18261
|||||| || || | ||||| || || |||| | |||| | | || ||| |
Sbjct 1796 TTGTTGGTCAGGTGGGATACCTTCTTTGTCTTGGATTT-TGGCTTTAACATTGTCAATGG 1738
Query 18262 TGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTT 18321
||||| || ||| ||| | ||| ||| |||| || ||||| ||||| || |||||||
Sbjct 1737 TGTCAGAGGATTCGACTTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTT 1678
Query 18322 GCATTTT 18328
|||| ||
Sbjct 1677 GCATCTT 1671
>seq631
Length=151218
Score = 105 bits (116), Expect = 5e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| || || || || ||||| ||||||||||||| || ||| | | ||||||
Sbjct 131385 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCCGTCTTCC 131326
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
|| ||||| || ||| | || | ||||||||| || || | ||||| || ||
Sbjct 131325 AACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTGTCCTGG 131266
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | | | ||||| || || ||| | ||||||| ||||
Sbjct 131265 ATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAGGTGATGGTTTTC 131206
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTTT 18329
|| ||||| ||||| ||||||||||||||||||
Sbjct 131205 CCAGTCAAAGTTTTAACAAAAATTTGCATTTTT 131173
>seq596
Length=25494
Score = 105 bits (116), Expect = 5e-18
Identities = 146/202 (72%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| |||||| || ||||||||||||||||||||||| | || ||| ||| |||||||
Sbjct 11942 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 12001
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
|||||||| || ||| |||| | ||||||||| || || | ||||| || ||
Sbjct 12002 AATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGG 12061
Query 18237 ATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTT 18295
|||| | || ||||| | | | ||||| || ||| ||| | ||||| | ||
Sbjct 12062 ATTT-TGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGACTTCTAGAGTGATAGTCTT 12120
Query 18296 GCCGGTCAATGTTTTTACAAAA 18317
|| || || ||||| ||||||
Sbjct 12121 ACCAGTTAAGGTTTTGACAAAA 12142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379340574168045
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |