Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq506 140 2e-28 seq631 105 5e-18 seq596 105 5e-18 >seq506 Length=5049 Score = 140 bits (154), Expect = 2e-28 Identities = 182/247 (74%), Gaps = 5/247 (2%) Strand=Plus/Minus Query 18085 TTTCTTTTTGTTATC--CTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTG 18142 ||||||||| ||| | | || | | ||| | |||| |||||| || ||||||||||| Sbjct 1915 TTTCTTTTT-TTACCACCACCTCTCAATCTCAAAACCAAGTGAAGGGTGGATTCTTTTTG 1857 Query 18143 AATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCT 18202 |||||||||||| | || ||| ||| ||||||||||||||| || ||| |||| | ||| Sbjct 1856 AATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCT 1797 Query 18203 TTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTG-CAACAG 18261 |||||| || || | ||||| || || |||| | |||| | | || ||| | Sbjct 1796 TTGTTGGTCAGGTGGGATACCTTCTTTGTCTTGGATTT-TGGCTTTAACATTGTCAATGG 1738 Query 18262 TGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTT 18321 ||||| || ||| ||| | ||| ||| |||| || ||||| ||||| || ||||||| Sbjct 1737 TGTCAGAGGATTCGACTTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTT 1678 Query 18322 GCATTTT 18328 |||| || Sbjct 1677 GCATCTT 1671 >seq631 Length=151218 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| || || || || ||||| ||||||||||||| || ||| | | |||||| Sbjct 131385 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCCGTCTTCC 131326 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 || ||||| || ||| | || | ||||||||| || || | ||||| || || Sbjct 131325 AACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTGTCCTGG 131266 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | | | ||||| || || ||| | ||||||| |||| Sbjct 131265 ATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAGGTGATGGTTTTC 131206 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTTT 18329 || ||||| ||||| |||||||||||||||||| Sbjct 131205 CCAGTCAAAGTTTTAACAAAAATTTGCATTTTT 131173 >seq596 Length=25494 Score = 105 bits (116), Expect = 5e-18 Identities = 146/202 (72%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| |||||| || ||||||||||||||||||||||| | || ||| ||| ||||||| Sbjct 11942 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 12001 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 |||||||| || ||| |||| | ||||||||| || || | ||||| || || Sbjct 12002 AATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGG 12061 Query 18237 ATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTT 18295 |||| | || ||||| | | | ||||| || ||| ||| | ||||| | || Sbjct 12062 ATTT-TGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGACTTCTAGAGTGATAGTCTT 12120 Query 18296 GCCGGTCAATGTTTTTACAAAA 18317 || || || ||||| |||||| Sbjct 12121 ACCAGTTAAGGTTTTGACAAAA 12142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379340574168045