Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq664 394 1e-104 seq627 309 4e-79 >seq664 Length=41649 Score = 394 bits (436), Expect = 1e-104 Identities = 1458/2255 (65%), Gaps = 81/2255 (4%) Strand=Plus/Minus Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105 || || || |||| ||| || || | || || | | |||||||| || ||||| | | Sbjct 34915 GTAAACTGGATGGCAGCAGAAGCAGCTTGGGTTCTCAAGTAGTACATCCCTGTTTTCAAA 34856 Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC-TGCTA 62163 || | ||| ||||| |||||||| || ||||| || | || | || | Sbjct 34855 CCTTTAGACCACCCGTAGAAATGCATGGAGGTCAGTTTCCCCATTGTTGGGGCCATG--A 34798 Query 62164 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62223 | |||||||| | ||| ||| |||||| ||||| || ||||| |||||||| | | Sbjct 34797 TGTGGATATTTAGAGAGTGAGATTGATCAATGAAAGCGGATCTGTCAGCAGCCATGTCGA 34738 Query 62224 TGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 62282 ||||||||||||| | | |||||||| ||||| || || || | ||| |||| ||| Sbjct 34737 TGATCGTCTTTTGAGACAATTCCCAAACTGTTTTGTACAAGTCTTTCAAT-TCTTGAGGA 34679 Query 62283 AGGTTTGTA---TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCA 62339 | ||||| | |||||||| || | | || || | || || |||| Sbjct 34678 ATGTTTGGCAAGTGTTGAATGGACCCGTTGTTGGCAATGATGTTTGATTTCATAGCATCG 34619 Query 62340 TTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTC 62398 ||||| ||| | || ||| |||| || | | || || || | ||||||||| Sbjct 34618 TTCCA-AATGCCCAAATCAACCAAATCTCTTAGCAAGTATGGATTGACAATTTGGAATTC 34560 Query 62399 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATT 62458 |||||||| ||| | || ||| || || || | ||||| | | || || | Sbjct 34559 ACCAGACAACGTTCTTCTAGAGTACATGTTTGAAGTGAATGGTTCGAAACATTCGTTGTA 34500 Query 62459 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 62518 ||||| ||||| | |||||||| || ||||| || |||| || || ||||| | Sbjct 34499 ACCCAAGATTTGCGATGTTGATGCTGTTGGCATTGGAGCCAATAACAATGAGTTTCTCAA 34440 Query 62519 ACC-GTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAA 62577 || || | | ||||| ||| | | | |||||| | ||| | ||| | || | Sbjct 34439 TCCAGTTTCCACA-ATTTTTTCTCTCAAAGATTCCCATTCCCACAAATCAGTTGGAGCTC 34381 Query 62578 CANNNNNNNNNNNATATTGTAGAATACC--GTTA--CTGGCGTACGATCCTACATATGTA 62633 | | |||| | || ||| || | |||| | || | | | || Sbjct 34380 TATCCCACATGTCAAATTGCAAAACACCTTGTGAAGCTGGTGAACCTTGGAA-AGAT--- 34325 Query 62634 TCATATGGTCCTTCCTTCTCAGCTAGTT---TACAACTCGCCTCTAATGCACCGTAATAA 62690 | ||||| ||||| | | | || | || | || | || |||||| | | || Sbjct 34324 TGGTATGGACCTTCTTCCACGGCCATTTCGTTTGAA---GATTCCAATGCAGCATGGTAC 34268 Query 62691 ATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTT 62750 | ||||| || || | |||| || | || |||| | |||||||||| | Sbjct 34267 AATGTTTCGAAAATTTGAATATTCAGTTGTTTGGCTTGTTCGGAATCAAATGGAATTCTC 34208 Query 62751 AAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 62810 || || ||||| | || || || ||||||||||||| | |||||||| |||||| || Sbjct 34207 AAAAGCATAAAAGTATCAGCCAAACCTTGAACACCAAGGGCAATAGGTCTGTGTCTCATA 34148 Query 62811 TTAGAGATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62867 || ||| || ||| ||| | ||| |||||||| | || || | | | || | | Sbjct 34147 TTTGAGTTTCTTGCAGTTTCC---ACAGGGTAATAATTTCTGTCAATGACTCTGTTCAAA 34091 Query 62868 TTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---------TCGC 62918 ||||| ||| ||||| | ||||| | | ||| | |||||| | | | Sbjct 34090 TTTCTTGTAATGACTTTTGCAACATCGTGTAATTTTTGGAAATCATAAGTTTGTTGTTGA 34031 Query 62919 CCATCTATTACAAACAT----------GTTCAATGCAACAGATGCCAGATTACACACGGC 62968 |||||| | |||||| | ||| |||| ||| |||| |||||| || || Sbjct 34030 CCATCTTCTG-AAACATTGATGAAAGCGGGCAAAGCAATAGAAGCCAAATTACAAACAGC 33972 Query 62969 ---TACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGAT 63025 | | || ||| || | ||||| | || ||| || | |||| | ||||| Sbjct 33971 AGTTTCGTCGTTA---TCTGAATATTCCACAATTTCACAACACAAATTAGATGATTTGAT 33915 Query 63026 AGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGG 63085 |||||||||||||| ||||||| ||||||||||| ||||| || |||| ||| ||||| Sbjct 33914 AGTTCCTAAATTTTTTTGATTAGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGG 33855 Query 63086 AGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTAT 63145 ||||| |||||| | || | ||| | || || | ||| | | | || |||| || Sbjct 33854 TGTACCTGTTTCAGTTTGTGCTTCCAAGATAGCATACCATAATTTTTGTGC-TTTA--AT 33798 Query 63146 AGATTTG-TATCTCCT--TTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCC 63202 || ||| || ||| | |||| | ||| | | |||||| ||| || || | || Sbjct 33797 AGTTTTTCTACCTCTTCCTTCTGAAACATATCTATTGTACAATTTTTCAAAATCTGCACC 33738 Query 63203 CCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATC 63262 |||||| || | ||| |||| ||| | | ||| | ||| ||| | || Sbjct 33737 ATAAACATCACTTAAACCTGGAGCTTCACTTGGAGAAAACAATGTCCAATCTGAATTTTC 33678 Query 63263 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCT 63322 || ||| || |||||| | ||| |||| ||| | || ||| | |||||||| ||| Sbjct 33677 TTTAACTTTTTGCATAAATAAATCTGGAACCCATAATGCAGGAAACAAATCTCTTGCTCT 33618 Query 63323 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63382 | ||| || || || ||| || || ||| | || | | ||||||| |||||| Sbjct 33617 AATTTCTTCTTTACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATGCCA 33558 Query 63383 CGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCT 63442 ||||| || || | || | | | ||||| | ||| || || || ||||| | ||||| Sbjct 33557 TGGTTCTAAATAAAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCT 33498 Query 63443 AGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACC 63502 || || ||||| ||||||| | ||||||||| | || || || | ||||| ||||| Sbjct 33497 TGCAGTATTATTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTCCCATTAGTACC 33438 Query 63503 GGAGATATAGCCTCCACTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCA 63561 | ||||| || | | | ||||||| ||| ||| ||||| || || || || Sbjct 33437 TGCAATATAAGAACCGGTTGATCTAATATTATGAATATGA-AGACCAATACCACCAGCAG 33379 Query 63562 TTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGA 63621 ||||||| || || || ||| |||||| || ||||| || || || ||| ||| || Sbjct 33378 TTTTAGAAATCAAAGCACATTCTTTTAAAGTATCATAAATACCATCAATGGAATCGTCTT 33319 Query 63622 TCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGG 63681 |||| || || ||||| ||||||||| | | | ||||| ||||| ||||| | Sbjct 33318 TCATAGCAACAAGGAAACATGAAGACATTTGAGGTCTTGGTGTTCCAGCATTGAATAAAG 33259 Query 63682 TAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGT 63741 | ||||| || || || || || | ||| | | ||| || || || | || | Sbjct 33258 TTGGAGATGCATGTGTGAAATATCTCAAAGACATCAAATTATAAGTTTCCAAGACTTTTT 33199 Query 63742 CTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAA 63801 | ||||| | |||||| || || || || | ||| | || || |||||||||||| Sbjct 33198 CAATATCTGAACCATGAATCCCGACAGCAACTCTCATGATCAAATGTTGAGGTCTTTCAG 33139 Query 63802 CAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGT 63861 |||||| || ||| | || || || ||| ||||||| ||||| ||||||||||| | Sbjct 33138 CAATTTGTCCATTGATTCTTAATAAATACGATCTTTCCAATGTTTTGAAACCAAAATAAT 33079 Query 63862 TGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAA 63921 | ||| || |||| || |||| |||| | ||| | ||| |||| ||| | | Sbjct 33078 TATATTGGAAATCTCTATCATAAACAATAGCACTATTTAAAACATCTTTATTTTTTTCTA 33019 Query 63922 CTAT---ATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAA 63978 | || || | | | ||| ||| || ||||| | | |||||||| ||||| Sbjct 33018 CAATTTGATAAACGTCATCACT---AATCATTGGAGATTTTAATCCATTTTTTTCATTAA 32962 Query 63979 CATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGAT 64038 |||| ||||||| || |||| | |||| ||||||| |||| || |||| || Sbjct 32961 CATAAAAATATAAATCTGAAATGACTTGAGAAAATTGTTTTTTAGTTTGTTTATGTAAAT 32902 Query 64039 TTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG--TTGT-GTAGTACAAG 64095 | || || || ||||| || || | | |||||||| ||||| | || || || || Sbjct 32901 TAGAAATAGCAATTCTTGCAGCCAATGTAGCATAATCAGGATGAATAGTGGTCATATAA- 32843 Query 64096 TGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTC 64155 || | |||| || |||| | | |||||||| | || || || || | ||| | | Sbjct 32842 --GCACATGTTTCAGCAGCCAAATTATCCAATTCAATAGTAGTAACACCTTCATAAACAC 32785 Query 64156 CTTGAATAA-CCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAG 64214 | |||| ||| | | || || |||||| ||||| | | | ||| ||||| Sbjct 32784 CAGATATAATTCTTTGT-GTAATAGAAACAGGATCAATATGGTTTGGATCTAAACCATAA 32726 Query 64215 CACAATTTTCTAATACGAGACGTGATTTTATCAAA 64249 || ||| | ||| | ||| |||||||||||||| Sbjct 32725 CATAATCTAGCAATTCTAGAAGTGATTTTATCAAA 32691 >seq627 Length=179744 Score = 309 bits (342), Expect = 4e-79 Identities = 609/896 (68%), Gaps = 10/896 (1%) Strand=Plus/Minus Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337 |||||| || |||||| || ||| || | |||||| || ||||| ||||| ||| | Sbjct 173547 CATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGC 173488 Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397 ||||| ||||||||||| |||||||| ||||| | |||||| ||| ||||| | || Sbjct 173487 TAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCATTACC 173428 Query 33398 CAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATT 33457 ||| || | |||||||| || || ||||| | |||| ||||||| | || ||| Sbjct 173427 TAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATT 173368 Query 33458 CATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGC 33517 ||| |||| | ||| || | || | || | || || |||||| || || || Sbjct 173367 CATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACAGC 173308 Query 33518 ATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACAT 33577 | || ||||| | | || ||| | | ||| || | ||||||| ||| | Sbjct 173307 TTCAGTAATAATTCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAATAA 173248 Query 33578 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGT 33637 | |||||| ||||| ||| || || || ||||||| ||| ||||| || ||||| || Sbjct 173247 TAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAAGT 173188 Query 33638 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA 33697 | || ||||| | || || || | |||||| || | ||| ||||| |||||||| Sbjct 173187 CAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAAAA 173128 Query 33698 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAA-CCGGCGCTGTC 33754 ||| | ||||| || |||||||| || | | ||| || | |||| | | || Sbjct 173127 GAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCATC 173068 Query 33755 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 33814 || ||||| | |||||| || || || | ||| | || || ||||| || || Sbjct 173067 TTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATAGC 173008 Query 33815 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 33874 ||| || | | | |||| || |||||| | |||||||||||||||||| ||| Sbjct 173007 ATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGCGAATA 172948 Query 33875 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33934 |||| ||| || ||||| || || || || ||||| |||||| |||| || | Sbjct 172947 TGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTCTGG 172888 Query 33935 AATCTGCACTTCTGTAC--AAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTG 33992 |||||||||||| | || ||| || || | ||||| ||||| || || ||||| Sbjct 172887 AATCTGCACTTCAGCACTGAAATTC--TCCACCAAATTCTCATTGACAATCCCATCTGAA 172830 Query 33993 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTA 34049 || || ||||| || || || | || ||| || |||| | | | | | ||| Sbjct 172829 GCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTATTA 172770 Query 34050 TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCT 34109 ||||| || | ||||||||| || | ||| | |||||| | ||||||||||| || || Sbjct 172769 TTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGCTTCA 172710 Query 34110 GCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 34165 || ||| || | |||||| ||||| |||| |||||| || | ||||||||| Sbjct 172709 GCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATCT 172654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629811766314480