Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq664 405 5e-108
seq627 277 2e-69
>seq664
Length=41649
Score = 405 bits (448), Expect = 5e-108
Identities = 1256/1909 (66%), Gaps = 85/1909 (4%)
Strand=Plus/Minus
Query 36826 GTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATACTG 36885
||||||| || ||||| || ||||| | || ||| ||||| |||||||| |
Sbjct 34885 GTTCTCAAGTAGTACATCCCTGTTTTCAAACCTTTAGACCACCCGTAGAAATGCATGGAG 34826
Query 36886 GTCAGTTTTGCGTATGTAGG----ATTATCTATATATATTGTCATTGATTGACTTTGATC 36941
|||||||| | ||| || || || | |||| | | | ||| || ||||||
Sbjct 34825 GTCAGTTTCCCCATTGTTGGGGCCATGATGTGGATATTTAGAGAGTGA--GA--TTGATC 34770
Query 36942 TATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATCTCCCAAAC 37001
|| || || |||||| || ||||| || | || |||||||| | ||||||||
Sbjct 34769 AATGAAAGCGGATCTGTCAGCAGCCATGTCGATGATCGTCTTTTGAGACAATTCCCAAAC 34710
Query 37002 CGTTTTATATATTTGTTTTATATTATCTGGTAAATCT-----AAATGTTGAATAGAACCA 37056
||||| || | | ||| | ||| | || ||| | || |||||||| || ||
Sbjct 34709 TGTTTTGTACAAGTCTTTCA-ATTCT-TGAGGAATGTTTGGCAAGTGTTGAATGGACCCG 34652
Query 37057 TTATGTAACACAATTGTATTCTTT-ATGTCATTATTCCACAT----ATTTCTACTTATTA 37111
|| | | || ||| | ||| || ||| ||||| || | || || | |
Sbjct 34651 TTGT-TGGCAATGATGTTTGATTTCATAGCATCGTTCCAAATGCCCAAATCAACCAAAT- 34594
Query 37112 GTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTAT 37171
|||| | | || |||||| |||| || || || ||||| || |||||| | |
Sbjct 34593 ---CTCTTAGCAAGTATGGATTGACAATTTGGAATTCACCAGACAACGTTCTTCTAGAGT 34537
Query 37172 ATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATG 37231
| || || ||| ||||||| | | || || | || || ||||| ||||| ||||
Sbjct 34536 ACATGTTTGAAGTGAATGGTTCGAAACATTCGTTGTAACCCAAGATTTGCGATGTTGATG 34477
Query 37232 CAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTT 37291
| || |||||||| || | || | |||||||||||| | |||| | | |
Sbjct 34476 CTGTTGGCATTGGAGCCAATAACAATGAGTTTCTCAATCCAGTTTCCACAATTTTTTCTC 34417
Query 37292 TTAGTTCATTCCAATCCCATAAATCTGTTGG-GTTCTTTAACCACATATCATATTGTAGA 37350
| | | ||| ||||| ||||| ||||| | ||| | |||||| ||| |||| | |
Sbjct 34416 TCAAAGATTCCCATTCCCACAAATCAGTTGGAGCTCTATC-CCACATGTCAAATTGCAAA 34358
Query 37351 ATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTA--GCTA 37408
| ||||| ||||| ||| | | | | | || || || | || | || |
Sbjct 34357 ACACCTTGTGAAGCTGGTGAACCTTGGAAAGATTGGTATGGACCTTC--TTCCACGGCCA 34300
Query 37409 GTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATA 37468
|||| |||||| | ||| |||| || | ||||||||||||||| ||||| | |
Sbjct 34299 TTTCGTTTGAAGATTCCAATGCAGCATGGTACAATGTTTCGAAAATTTGAATATTCAGTT 34240
Query 37469 TTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCT 37528
||| |||| |||| ||| |||| | | ||| | ||||| |||||||||||| |
Sbjct 34239 GTTTGGCTTGTTCGGAATCAAATGGAATTCTCAAAAGCATAAAAGTATCAGCCAAACCTT 34180
Query 37529 GAACACCGATACCTATGGGTCTATGTTTCTTATTAGA---TCTAGACGATTCTATCACTG 37585
||||||| | | || ||||| ||| || |||| || ||| | | ||| ||| |
Sbjct 34179 GAACACCAAGGGCAATAGGTCTGTGTCTCATATTTGAGTTTCTTGCAGTTTC---CACAG 34123
Query 37586 GATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATTTTCGTAATTATTC 37645
| |||||||| | || || | | | || | |||| | | | ||| | || ||
Sbjct 34122 GGTAATAATTTCTGTCAATGACTCTGTTCAAATTTCTTGTAATGACTTTTGCAAC-ATCG 34064
Query 37646 TC-AACTTGTCGAA--CATAAATACGTTATT----AT----TAACAAATTTACT------ 37688
| || || | ||| ||||| | ||| || || | | | ||| |
Sbjct 34063 TGTAATTTTTGGAAATCATAAGTTTGTTGTTGACCATCTTCTGAAACATTGATGAAAGCG 34004
Query 37689 --CAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTA-CTAAATTGT-- 37743
||| | |||||| | | |||||| |||||| ||| || |||| || ||| |
Sbjct 34003 GGCAAAGCAATAGAAGCCAAATTACAAACAGCAGTTTCGTC---GTTATCTGAATATTCC 33947
Query 37744 ATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTT 37803
| ||| || ||| | |||| ||| | || ||||| ||||| ||||||| ||||||
Sbjct 33946 ACAATTTCACAACACAAATTAGATGATTTGATAGTTCCTAAATTTTTTTGATTAGATTTT 33887
Query 37804 TTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATA 37863
|| ||||||| |||||| || | ||| | || || ||| ||| |||| || || |
Sbjct 33886 TTGTTACAAGCATCTTTGTAAACAATAAATGGTGTACCTGTTTCAGTTTGTGCTTCCAAG 33827
Query 37864 ATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTTAAtt--tttttCTT-TGTTTCG 37920
|||| | |||||| || |||||||| | | ||| | | || ||| || |
Sbjct 33826 ATAGCATACCATAATTTTTGTGCTTTAA---TAGTTTTTCTACCTCTTCCTTCTGAAACA 33770
Query 37921 TATTCTATA-TATAATTTGTTAAAATCATTCCCCCATA--CATCGCATAATCCTGGACAT 37977
||| |||| || ||||| | |||||| | | ||||| |||| | ||| |||||| |
Sbjct 33769 TAT-CTATTGTACAATTTTTCAAAATC--TGCACCATAAACATCACTTAAACCTGGAGCT 33713
Query 37978 TCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCA 38037
|| | |||| | | | | ||| ||| || || || || || ||||||||||||
Sbjct 33712 TCACTTGGAGAAAACAATGTCCAATCTGAATTTTCTTTAACTTTTTGCATAAATAAATCT 33653
Query 38038 GGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTT 38097
|| ||||||||||||| ||| |||||| | | |||| |||||| || || ||| |||
Sbjct 33652 GGAACCCATAATGCAGGAAACAAATCTCTTGCTCTAATTTCTTCTTTACCATGATT-TTT 33594
Query 38098 CTTAAGCTTAG-AAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGC 38156
| || | | |||||| || |||||| ||||||||||||| ||||| | | ||
Sbjct 33593 CCGAATATCAATAAAATCAAAAATATCACTATGCCATGGTTCTAAATAAAGAGCAAAAGC 33534
Query 38157 TCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAA 38216
|| |||||||||| ||| || |||| || |||||| | || ||||| | | ||| |
Sbjct 33533 ACCAGGTCTTTTATTACCACCTTGATCAACATATCTTGCAGTATTATTGAAAACTCTAAT 33474
Query 38217 CATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCG 38276
||| || | | |||||||| | || || |||| | ||||||| ||| | | ||
Sbjct 33473 CATTGGAATCAATCCATTAGAAGTCCCATTAGTACCTGCAATATAAGAACCGGTTGATCT 33414
Query 38277 TATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTT 38336
|||||| || | || || ||||| ||| ||| || || ||||| |||| |||
Sbjct 33413 AATATTATGAATATGAAGACCAATACCACCAGCAGTTTTAGAAATCAAAGCACATTCTTT 33354
Query 38337 TAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGA 38396
||| |||||| | ||||| || || || || || || | | | ||||| |||
Sbjct 33353 TAAAGTATCATAAATACCATCAATGGAATCGTCTTTCATAGCAACAAGGAAACATGAAGA 33294
Query 38397 CATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTT 38456
||||||||| ||| ||||| || || ||||| || |||||||||||| |||| || |
Sbjct 33293 CATTTGAGGTCTTGGTGTTCCAGCATTGAATAAAGTTGGAGATGCATGTGTGAAATATCT 33234
Query 38457 TTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAG 38516
|||| ||||||| ||||| | || | || ||||| || ||||| || |
Sbjct 33233 CAAAGACATCAAATTATAAGTTTCCAAGACTTTTTCAATATCTGAACCATGAATCCCGAC 33174
Query 38517 AGATACCCTCATTAGCATATGTTGTGGTCTTT---CTATTATTTTATT-ATTCTGTTTAA 38572
|| || ||||| | || |||||| ||||||| | ||| | ||| |||| ||||
Sbjct 33173 AGCAACTCTCATGATCAAATGTTGAGGTCTTTCAGCAATTTGTCCATTGATTC---TTAA 33117
Query 38573 GTAGATACGATTTTTCTAATGTTTTTATTCCAAAATAACTATATGAATAATCTCTATCGT 38632
|| ||||||| |||| |||||||| | ||||||||| ||||| |||||||||| |
Sbjct 33116 -TAAATACGATCTTTCCAATGTTTTGAAACCAAAATAATTATATTGGAAATCTCTATCAT 33058
Query 38633 ATGCTATTACATTATCGATTATATCTCTATGTTTATTTACTTGTTGATA 38681
| | || || ||| | | |||| ||| ||| | ||| ||||||
Sbjct 33057 AAACAATAGCACTATTTAAAACATCTTTATTTTTTTCTACAATTTGATA 33009
>seq627
Length=179744
Score = 277 bits (306), Expect = 2e-69
Identities = 602/888 (68%), Gaps = 20/888 (2%)
Strand=Plus/Minus
Query 11339 TTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATAC 11398
|||||||| ||| ||||| | ||| || ||||| || |||||| ||| ||| ||||
Sbjct 173534 TTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGCTAATGAAATATTT 173475
Query 11399 TCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAAT 11458
|||||||| ||| ||||| | ||||| | ||||||| |||||| | |||
Sbjct 173474 TCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCATTACCTAATGCAACCAAT 173415
Query 11459 AATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAGA 11518
|||||||| || || ||||| | ||| ||| ||| || | ||||||||||| | |
Sbjct 173414 AATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATTCATACCTAATAAA 173355
Query 11519 TCCACCGGAATAGCAACTGTCAAAAACTCCTTTT-CTATATTAACCGCATCAATGATTAT 11577
|| || | ||| || |||||| || |||| | ||| ||| || ||| | || ||
Sbjct 173354 GAAACAGGCAATGCATCT-TCAAAATATCTTTTTTCAATAGAAACAGCTTCAGTAATAAT 173296
Query 11578 CGACGTTATAACTTCCTTAGAT--GGTGGATGTAATAAATGTTTAAACATTAAACACGCA 11635
| || | || ||| ||| || | ||||||| ||| | || ||| |||
Sbjct 173295 T--CTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAATAATAGACATGCA 173238
Query 11636 AAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGC 11695
|||||| |||| ||||| ||||||| || | |||||| ||||| || || || |||
Sbjct 173237 AAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTCAAACCTGGC 173178
Query 11696 ATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCC 11755
||||| || ||| |||| |||||| || |||||||||||||| |||||||| | ||
Sbjct 173177 ATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAAAAGAAAACACCT 173118
Query 11756 TCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA--CCTTGTT--GCTAGATATCCA 11811
|| ||||| |||||||| || | |||||| || ||| | | || || || |||||
Sbjct 173117 TCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCATCTTGA-ATCCA 173059
Query 11812 TTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAATA- 11870
| | | ||||| |||||||| | ||| | | || ||||| ||||| || || |
Sbjct 173058 TCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATAGCATTGAACAA 172999
Query 11871 -AATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACATTTCT 11929
||| || ||||| | |||| | | ||| ||||| || || | ||| ||||
Sbjct 172998 GAATTCA--CTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGCGAATATGTTTCA 172941
Query 11930 GAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTGT 11989
||| ||||||||||| ||||| || || || |||||| || |||| | |||
Sbjct 172940 CTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTCTGGAATCTGC 172881
Query 11990 ACATCCACA-TAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAA 12048
|| || || | |||| | ||| | ||||||||||| ||||| ||||| || || ||
Sbjct 172880 ACTTCAGCACTGAAAT-TCTCCACCAAATTCTCATTGACAATCCCATCTGAAGCAGCGAA 172822
Query 12049 AAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAAT---TTATCCCAATC 12105
|||||||| | | || || || |||| | || | | | | |||| ||| ||
Sbjct 172821 AAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTATTATTCCAGTC 172762
Query 12106 ATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATTGTTT 12165
| | |||||| || | ||| | |||||| | |||||||| || | | ||||
Sbjct 172761 GTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGCTTCAGCACGTTT 172702
Query 12166 ATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACGAACCT 12213
|| || |||||| ||||| || || || || || | ||| || ||
Sbjct 172701 GTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATCT 172654
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468520460289040
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