Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq664 407 2e-108 seq627 320 2e-82 >seq664 Length=41649 Score = 407 bits (450), Expect = 2e-108 Identities = 1462/2255 (65%), Gaps = 81/2255 (4%) Strand=Plus/Minus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 || || || |||| ||| || || | || || | | |||||||| || ||||| | | Sbjct 34915 GTAAACTGGATGGCAGCAGAAGCAGCTTGGGTTCTCAAGTAGTACATCCCTGTTTTCAAA 34856 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC-TGCTA 64956 || | ||| ||||| |||||||| || ||||| || | || | || | Sbjct 34855 CCTTTAGACCACCCGTAGAAATGCATGGAGGTCAGTTTCCCCATTGTTGGGGCCATG--A 34798 Query 64957 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 65016 | |||||||| | ||| ||| |||||| ||||| || ||||| |||||||| | | Sbjct 34797 TGTGGATATTTAGAGAGTGAGATTGATCAATGAAAGCGGATCTGTCAGCAGCCATGTCGA 34738 Query 65017 TGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 65075 ||||||||||||| | | |||||||| ||||| || || || | ||| |||| ||| Sbjct 34737 TGATCGTCTTTTGAGACAATTCCCAAACTGTTTTGTACAAGTCTTTCAAT-TCTTGAGGA 34679 Query 65076 AGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCA 65132 | ||||| | |||||||| || | || || || | || || |||| Sbjct 34678 ATGTTTGGCAAGTGTTGAATGGACCCGTTGTTGGCAATGATGTTTGATTTCATAGCATCG 34619 Query 65133 TTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 65191 ||||| ||| | || ||| |||| || | | ||||| || | ||| ||||| Sbjct 34618 TTCCA-AATGCCCAAATCAACCAAATCTCTTAGCAAGTATGGATTGACAATTTGGAATTC 34560 Query 65192 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATT 65251 |||||||| ||| | || ||| || || || | ||||| | | | || || | Sbjct 34559 ACCAGACAACGTTCTTCTAGAGTACATGTTTGAAGTGAATGGTTCGAAACATTCGTTGTA 34500 Query 65252 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 65311 ||||| ||||| | |||||||| || ||||| || |||| || || ||||| | Sbjct 34499 ACCCAAGATTTGCGATGTTGATGCTGTTGGCATTGGAGCCAATAACAATGAGTTTCTCAA 34440 Query 65312 ACC-GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 65370 || || | | ||||| ||| | | || |||||| | ||| | ||| | || | Sbjct 34439 TCCAGTTTCCACA-ATTTTTTCTCTCAAAGATTCCCATTCCCACAAATCAGTTGGAGCTC 34381 Query 65371 CNNNNNNNNNNNNNNNTTGTAGAATACC--GTTA--CTGGCGTACGATCCTACATATGTA 65426 ||| | || ||| || | |||| | || | | | || Sbjct 34380 TATCCCACATGTCAAATTGCAAAACACCTTGTGAAGCTGGTGAACCTTGGAA-AGAT--- 34325 Query 65427 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 65486 | |||||| ||||| | | | || | ||| | || |||||| | | || | Sbjct 34324 TGGTATGGACCTTCTTCCACGGCCATTTCGTTTGAAGATTCCAATGCAGCATGGTACAAT 34265 Query 65487 GTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAG 65546 |||||||| || | |||| || | || |||| | |||||||||| | || Sbjct 34264 GTTTCGAAAATTTGAATATTCAGTTGTTTGGCTTGTTCGGAATCAAATGGAATTCTCAAA 34205 Query 65547 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 65606 || ||||| | || || || ||||||||||||| | |||||||| |||||| |||| Sbjct 34204 AGCATAAAAGTATCAGCCAAACCTTGAACACCAAGGGCAATAGGTCTGTGTCTCATATTT 34145 Query 65607 GAGATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 65663 ||| || ||| ||| | ||| |||||||| | || || | | | || | |||| Sbjct 34144 GAGTTTCTTGCAGTTTCC---ACAGGGTAATAATTTCTGTCAATGACTCTGTTCAAATTT 34088 Query 65664 CTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---------TCGCTCA 65714 || ||| ||||| | ||||| | | ||| | |||||| | | | || Sbjct 34087 CTTGTAATGACTTTTGCAACATCGTGTAATTTTTGGAAATCATAAGTTTGTTGTTGACCA 34028 Query 65715 TCTATTACAAACAT----------GTTCAATGCAACAGATGCCAGATTACAAACGGC--- 65761 ||| | |||||| | ||| |||| ||| |||| ||||||||| || Sbjct 34027 TCTTCTG-AAACATTGATGAAAGCGGGCAAAGCAATAGAAGCCAAATTACAAACAGCAGT 33969 Query 65762 TACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGT 65821 | | || ||| || | ||||| | || ||| || | |||| | ||||| || Sbjct 33968 TTCGTCGTTA---TCTGAATATTCCACAATTTCACAACACAAATTAGATGATTTGATAGT 33912 Query 65822 TCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGT 65881 ||||||||||| ||||||| ||||||||||| ||||| || |||| ||| ||||| || Sbjct 33911 TCCTAAATTTTTTTGATTAGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGT 33852 Query 65882 ACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGA 65941 ||| |||||| | || | ||| | || || | ||| | | | || |||| |||| Sbjct 33851 ACCTGTTTCAGTTTGTGCTTCCAAGATAGCATACCATAATTTTTGTGC-TTTA--ATAGT 33795 Query 65942 TTTG-TATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCA 65998 ||| || ||||| |||| | ||| | |||||| ||| || || | || | Sbjct 33794 TTTTCTACCTCTTCCTTCTGAAACATATCTATTGTACAATTTTTCAAAATCTGCACCATA 33735 Query 65999 AACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTT 66058 ||||| || || ||| |||| ||| | | ||| | ||| ||| | || || Sbjct 33734 AACATCACTTAAACCTGGAGCTTCACTTGGAGAAAACAATGTCCAATCTGAATTTTCTTT 33675 Query 66059 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATG 66118 ||| || |||||| | ||| |||| ||| | || ||| |||||||| | |||| Sbjct 33674 AACTTTTTGCATAAATAAATCTGGAACCCATAATGCAGGAAACAAATCTCTTGCTCTAAT 33615 Query 66119 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGG 66178 ||| || || || ||| || || ||| | || | | ||||||| |||||| || Sbjct 33614 TTCTTCTTTACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATGCCATGG 33555 Query 66179 TTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 66238 ||| || || | || | | | ||||| | ||| || || || ||||| | ||||| || Sbjct 33554 TTCTAAATAAAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTTGC 33495 Query 66239 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGA 66298 || ||||| ||||||| | ||||||||| | ||||| || || ||||| || || | Sbjct 33494 AGTATTATTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTCCCATTAGTACCTGC 33435 Query 66299 GATATAGCTTCCACTTGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTT 66357 ||||| || ||| | ||||||| ||| ||| ||||| || || || || ||| Sbjct 33434 AATATAAGAACCGGTTGATCTAATATTATGAATATGA-AGACCAATACCACCAGCAGTTT 33376 Query 66358 TAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCA 66417 |||| || || || ||| |||||| |||||||| || || || || ||| || ||| Sbjct 33375 TAGAAATCAAAGCACATTCTTTTAAAGTATCATAAATACCATCAATGGAATCGTCTTTCA 33316 Query 66418 TGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAG 66477 | || || ||||| ||||||||| | | ||||| ||||| ||||| || | Sbjct 33315 TAGCAACAAGGAAACATGAAGACATTTGAGGTCTTGGTGTTCCAGCATTGAATAAAGTTG 33256 Query 66478 GAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTA 66537 |||| || || || || || | ||| | | ||| || || || | || || | Sbjct 33255 GAGATGCATGTGTGAAATATCTCAAAGACATCAAATTATAAGTTTCCAAGACTTTTTCAA 33196 Query 66538 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 66597 |||| | |||||| || || || || | ||| | || || |||||||||||| | | Sbjct 33195 TATCTGAACCATGAATCCCGACAGCAACTCTCATGATCAAATGTTGAGGTCTTTCAGCAA 33136 Query 66598 TCTTGTTGTTT-ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 66656 | |||| || ||| | || || || ||| ||||||| ||||| ||||||||||| || Sbjct 33135 T-TTGTCCATTGATTCTTAATAAATACGATCTTTCCAATGTTTTGAAACCAAAATAATTA 33077 Query 66657 TATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACT 66716 ||| || |||| || |||| |||| | || | ||| |||| ||| | || Sbjct 33076 TATTGGAAATCTCTATCATAAACAATAGCACTATTTAAAACATCTTTATTTTTTT---CT 33020 Query 66717 ACATCCATGGTAATACTTGA-----AATAATCGGAGAATGTTTCCCATTTTTAGGATTGA 66771 ||| || ||| || | | ||| || ||||| | | |||||||| ||| | Sbjct 33019 ACA-ATTTGATAA-ACGTCATCACTAATCATTGGAGATTTTAATCCATTTTTTTCATTAA 32962 Query 66772 CATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGAT 66831 |||| ||||||| || |||| | |||| ||||||| |||| ||| |||| || Sbjct 32961 CATAAAAATATAAATCTGAAATGACTTGAGAAAATTGTTTTTTAGTTTGTTTATGTAAAT 32902 Query 66832 TTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATG--TTGT-GTAGTACAAG 66888 | || | || ||||| || || | | |||||||| ||||| | || || || || Sbjct 32901 TAGAAATAGCAATTCTTGCAGCCAATGTAGCATAATCAGGATGAATAGTGGTCATATAA- 32843 Query 66889 TGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTC 66948 || | |||| || |||| | | |||||||| | || || || || | ||| | | Sbjct 32842 --GCACATGTTTCAGCAGCCAAATTATCCAATTCAATAGTAGTAACACCTTCATAAACAC 32785 Query 66949 CTTGGATAA-CCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAA 67007 | |||| ||| | | || || |||||| ||||| | | | ||| |||||| Sbjct 32784 CAGATATAATTCTTTGT-GTAATAGAAACAGGATCAATATGGTTTGGATCTAAACCATAA 32726 Query 67008 CATAATTTTCTAATACGAGATGTGATTTTATCAAA 67042 |||||| | ||| | ||| |||||||||||||| Sbjct 32725 CATAATCTAGCAATTCTAGAAGTGATTTTATCAAA 32691 >seq627 Length=179744 Score = 320 bits (354), Expect = 2e-82 Identities = 620/908 (68%), Gaps = 13/908 (1%) Strand=Plus/Minus Query 35854 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 35913 |||||| || |||||| || ||| || | |||||| || ||||| ||||||||| | Sbjct 173547 CATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGC 173488 Query 35914 TAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCC 35973 |||||| ||||||||||| ||||| |||||||| |||||||||| ||||| | || Sbjct 173487 TAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCATTACC 173428 Query 35974 CAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATT 36033 ||| || | |||||||| || |||||||| | |||| ||||||| | || ||| Sbjct 173427 TAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATT 173368 Query 36034 CATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGC 36093 ||| |||| | ||| || | || | || | || || ||||||||| || || Sbjct 173367 CATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACAGC 173308 Query 36094 GTCTGTTATAATAGATATTACTGTTTCTTCACTC-GGTGGATACAATAAATGTTTAAACA 36152 || || ||||| | | | | || || || ||| || ||||||| ||| | Sbjct 173307 TTCAGTAATAATTCTT-TCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAATA 173249 Query 36153 TCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACG 36212 | |||||| ||||| |||||| || || ||||||| ||| ||||| || ||||| | Sbjct 173248 ATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAAG 173189 Query 36213 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAA 36272 | | || ||||| | || || || | |||||| || | |||||||| || |||| Sbjct 173188 TCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAAA 173129 Query 36273 AGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCAT 36332 |||||| ||||| || || ||||| || | | ||| || || | ||| |||| Sbjct 173128 AGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCAT 173069 Query 36333 GT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 36389 | ||||| | |||||| || || || | ||| | || || || || |||| Sbjct 173068 CTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATAG 173009 Query 36390 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 36449 |||| || | | | |||| || |||||| | ||| ||||| |||||||| || Sbjct 173008 CATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGCGAAT 172949 Query 36450 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGG 36509 | |||| ||| || ||||| || ||||| || ||||| |||||| |||| || | Sbjct 172948 ATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTCTG 172889 Query 36510 TAATCTGTACTTCTGTAC--AAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACT 36567 |||||| ||||| | || ||| || || | ||||| ||||| || || || || Sbjct 172888 GAATCTGCACTTCAGCACTGAAATTC--TCCACCAAATTCTCATTGACAATCCCATCTGA 172831 Query 36568 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGT---TT 36624 || || ||||| || || || | || ||| || |||| ||| | | | || Sbjct 172830 AGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTATT 172771 Query 36625 ATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTC 36684 |||||| || | ||||||||| || | ||| | |||||| | ||||||||||| || || Sbjct 172770 ATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGCTTC 172711 Query 36685 TGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATC-TAT 36743 || ||| || | |||||| ||||| |||| |||||||| | |||||||| | | Sbjct 172710 AGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATCTTCT 172651 Query 36744 TTTGATTT 36751 |||| ||| Sbjct 172650 TTTGTTTT 172643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658166703674440