Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq664 464 9e-126 seq627 306 5e-78 >seq664 Length=41649 Score = 464 bits (514), Expect = 9e-126 Identities = 1474/2252 (65%), Gaps = 75/2252 (3%) Strand=Plus/Minus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 || || || |||| ||| || || | || || | | |||||||| || ||||| | | Sbjct 34915 GTAAACTGGATGGCAGCAGAAGCAGCTTGGGTTCTCAAGTAGTACATCCCTGTTTTCAAA 34856 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC-TGCTA 78835 || | ||| |||||||||||||| || ||||| || | || | || | Sbjct 34855 CCTTTAGACCACCCGTAGAAATGCATGGAGGTCAGTTTCCCCATTGTTGGGGCCATG--A 34798 Query 78836 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 78895 | |||||||| | ||| ||| |||||| ||||| || ||||| |||||||| | | Sbjct 34797 TGTGGATATTTAGAGAGTGAGATTGATCAATGAAAGCGGATCTGTCAGCAGCCATGTCGA 34738 Query 78896 TGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 78954 ||||||||||||| | | |||||||| ||||| || || || | ||| |||| ||| Sbjct 34737 TGATCGTCTTTTGAGACAATTCCCAAACTGTTTTGTACAAGTCTTTCAAT-TCTTGAGGA 34679 Query 78955 AGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCA 79011 | ||||| | |||||||| || | || || || | || || | || Sbjct 34678 ATGTTTGGCAAGTGTTGAATGGACCCGTTGTTGGCAATGATGTTTGATTTCATAGCATCG 34619 Query 79012 TTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 79070 ||||| ||| | || ||| |||| || | | ||||| || | ||| ||||| Sbjct 34618 TTCCA-AATGCCCAAATCAACCAAATCTCTTAGCAAGTATGGATTGACAATTTGGAATTC 34560 Query 79071 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATT 79130 |||||||| ||| | || ||| || || || ||||||| | |||| || | Sbjct 34559 ACCAGACAACGTTCTTCTAGAGTACATGTTTGAAGTGAATGGTTCGAAACATTCGTTGTA 34500 Query 79131 TCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAG 79190 ||||| ||||| | |||||||| |||||||| || |||| || || ||||| | Sbjct 34499 ACCCAAGATTTGCGATGTTGATGCTGTTGGCATTGGAGCCAATAACAATGAGTTTCTCAA 34440 Query 79191 ACC-GTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAA 79249 || || | | ||||| ||| | | ||||||||| ||||| | ||||| || | Sbjct 34439 TCCAGTTTCCACA-ATTTTTTCTCTCAAAGATTCCCATTCCCACAAATCAGTTGGAGCTC 34381 Query 79250 CATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCAT 79309 || ||| | ||| |||| | || ||| | ||| ||| ||| | | | || | Sbjct 34380 TATCCCACATGTCAAATTGCAAAACACCTTGTGAAGCTGGTGAACCTTGGAAAGATTGGT 34321 Query 79310 AAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTT 79369 | || ||||| | |||| | ||| | || ||||| | | || | |||| Sbjct 34320 ATGGACCTTCTTCCACGGCCATTTCGTTTGAAGATTCCAATGCAGCATGGTACAATGTTT 34261 Query 79370 CGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAA 79429 ||||||| | |||| || | || |||| | | |||||||||| | || || | Sbjct 34260 CGAAAATTTGAATATTCAGTTGTTTGGCTTGTTCGGAATCAAATGGAATTCTCAAAAGCA 34201 Query 79430 TAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAA 79489 |||| | || || || ||||||||||||| | |||||||| |||||| |||| || Sbjct 34200 TAAAAGTATCAGCCAAACCTTGAACACCAAGGGCAATAGGTCTGTGTCTCATATTTGAGT 34141 Query 79490 TTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGA 79546 || ||| ||| | ||| |||||||| | || || | | | || | ||| || Sbjct 34140 TTCTTGCAGTTTCC---ACAGGGTAATAATTTCTGTCAATGACTCTGTTCAAATTTCTTG 34084 Query 79547 CTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA---------TCGTCCATCTA 79597 || ||||| | ||||| | || ||| | |||||| | | | |||||| Sbjct 34083 TAATGACTTTTGCAACATCGTGTAATTTTTGGAAATCATAAGTTTGTTGTTGACCATCTT 34024 Query 79598 TTACAAACAT----------GTTCAACGCGACAGATGCCAGATTACAAACGGC---TACC 79644 | |||||| | ||| || | ||| |||| ||||||||| || | | Sbjct 34023 CTG-AAACATTGATGAAAGCGGGCAAAGCAATAGAAGCCAAATTACAAACAGCAGTTTCG 33965 Query 79645 TCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCT 79704 || ||| || | ||||| | |||||| || | ||| | || || |||||| Sbjct 33964 TCGTTA---TCTGAATATTCCACAATTTCACAACACAAATTAGATGATTTGATAGTTCCT 33908 Query 79705 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCA 79764 ||||||| ||||||| ||||||||||| ||||| || |||| ||| || || ||||| Sbjct 33907 AAATTTTTTTGATTAGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGTACCT 33848 Query 79765 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTG 79824 |||||| | || | ||| | || || | ||| | | | || |||| |||| || Sbjct 33847 GTTTCAGTTTGTGCTTCCAAGATAGCATACCATAATTTTTGTGC-TTTA--ATAGTTTTT 33791 Query 79825 -TATCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACA 79881 || ||||| |||| | ||| | || ||| ||| || || | || ||||| Sbjct 33790 CTACCTCTTCCTTCTGAAACATATCTATTGTACAATTTTTCAAAATCTGCACCATAAACA 33731 Query 79882 TCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACT 79941 || ||| || ||| ||| ||| | | ||| | ||| ||| || || || ||| Sbjct 33730 TCACTTAAACCTGGAGCTTCACTTGGAGAAAACAATGTCCAATCTGAATTTTCTTTAACT 33671 Query 79942 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCC 80001 || |||||| | ||| |||| ||| | || ||| | |||||| | |||| || Sbjct 33670 TTTTGCATAAATAAATCTGGAACCCATAATGCAGGAAACAAATCTCTTGCTCTAATTTCT 33611 Query 80002 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 80061 || || || ||| || || ||| | || | | ||||||| |||||| ||||| Sbjct 33610 TCTTTACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATGCCATGGTTCT 33551 Query 80062 AAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 80121 || || | || | | | || |||| ||| || || || ||||| | ||||| || || Sbjct 33550 AAATAAAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTTGCAGTA 33491 Query 80122 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATA 80181 ||||| ||||||| | ||||||||| | ||||| || || ||||| || || | ||| Sbjct 33490 TTATTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTCCCATTAGTACCTGCAATA 33431 Query 80182 TAGCTTCCACTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTTAGA 80240 || || | | | ||||||| ||| ||| ||||| || || || || ||||||| Sbjct 33430 TAAGAACCGGTTGATCTAATATTATGAATATGA-AGACCAATACCACCAGCAGTTTTAGA 33372 Query 80241 GATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTT 80300 || || || ||| |||||| |||||||| || || || ||| ||| || |||| Sbjct 33371 AATCAAAGCACATTCTTTTAAAGTATCATAAATACCATCAATGGAATCGTCTTTCATAGC 33312 Query 80301 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 80360 || || ||||| ||||||||| | | ||||| ||||| ||||| || ||||| Sbjct 33311 AACAAGGAAACATGAAGACATTTGAGGTCTTGGTGTTCCAGCATTGAATAAAGTTGGAGA 33252 Query 80361 AGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC 80420 || || || || || | ||||| | ||| || || || | || ||| ||||| Sbjct 33251 TGCATGTGTGAAATATCTCAAAGACATCAAATTATAAGTTTCCAAGACTTTTTCAATATC 33192 Query 80421 CCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 80480 | |||||| || || || || | ||| | || || |||||||||||| | || || Sbjct 33191 TGAACCATGAATCCCGACAGCAACTCTCATGATCAAATGTTGAGGTCTTTCAGCAAT-TT 33133 Query 80481 GTT-ATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATG 80539 || ||| ||| | || || || ||| ||||||| ||||| ||||||||||| || ||| Sbjct 33132 GTCCATTGATTCTTAATAAATACGATCTTTCCAATGTTTTGAAACCAAAATAATTATATT 33073 Query 80540 AAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACA- 80598 || |||| || |||| |||| | || | ||| |||| ||| | ||||| Sbjct 33072 GGAAATCTCTATCATAAACAATAGCACTATTTAAAACATCTTTATTTTTTT---CTACAA 33016 Query 80599 -TCCAT---GGTGAT-ACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACAT 80653 | || || || ||| ||| || ||||| | | |||||||| |||||||| Sbjct 33015 TTTGATAAACGTCATCACT---AATCATTGGAGATTTTAATCCATTTTTTTCATTAACAT 32959 Query 80654 AGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTG 80713 | ||||||| || |||| | |||| ||||||| |||| || |||| ||| | Sbjct 32958 AAAAATATAAATCTGAAATGACTTGAGAAAATTGTTTTTTAGTTTGTTTATGTAAATTAG 32899 Query 80714 ATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG--TTGT-GTAGTACAAGTGG 80770 | | || ||||| || || || | |||||||| ||||| | || || || || | Sbjct 32898 AAATAGCAATTCTTGCAGCCAATGTAGCATAATCAGGATGAATAGTGGTCATATAA---G 32842 Query 80771 CTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTT 80830 | | |||| || |||| | | |||||||| | || || || || | ||| | || Sbjct 32841 CACATGTTTCAGCAGCCAAATTATCCAATTCAATAGTAGTAACACCTTCATAAACACCAG 32782 Query 80831 GGATAA-CCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACAT 80889 |||| ||| | | || || |||||| ||||| | | | ||| ||||||||| Sbjct 32781 ATATAATTCTTTGT-GTAATAGAAACAGGATCAATATGGTTTGGATCTAAACCATAACAT 32723 Query 80890 AATTTTCTAATACGAGACGTGATTTTATCAAA 80921 ||| | ||| | ||| |||||||||||||| Sbjct 32722 AATCTAGCAATTCTAGAAGTGATTTTATCAAA 32691 >seq627 Length=179744 Score = 306 bits (338), Expect = 5e-78 Identities = 608/895 (68%), Gaps = 8/895 (1%) Strand=Plus/Minus Query 49656 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 49715 |||||| || |||||| || ||| || | |||||| || ||||| ||||| ||| | Sbjct 173547 CATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGC 173488 Query 49716 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 49775 ||||| ||||||||||| |||||||| ||||| | |||||||||| ||||| | || Sbjct 173487 TAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCATTACC 173428 Query 49776 CAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATT 49835 ||| || | |||||||| || |||||||| | |||| ||||||| | || ||| Sbjct 173427 TAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATT 173368 Query 49836 CATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGC 49895 ||| |||| | ||| || | || | || | || || |||||| || || || Sbjct 173367 CATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACAGC 173308 Query 49896 ATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACAT 49955 || || ||||| | | || ||| | | ||| || ||||||| ||| | Sbjct 173307 TTCAGTAATAATTCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAATAA 173248 Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 | |||||| ||||| ||| || || || ||||||| ||| | ||| || ||||| || Sbjct 173247 TAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAAGT 173188 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 | || ||||| | || || || | |||||| || | |||||||| || ||||| Sbjct 173187 CAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAAAA 173128 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATA-ACTGGCGCTG--TC 50132 ||| | ||||| || || ||||| || || | ||| || || | | || || || Sbjct 173127 GAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCATC 173068 Query 50133 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 50192 || ||||| | |||||| || || || | ||| | || || ||||| || || Sbjct 173067 TTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATAGC 173008 Query 50193 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 50252 ||| || | | | |||| || |||||| | |||||||||||||||||| ||| Sbjct 173007 ATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGCGAATA 172948 Query 50253 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 50312 |||| ||| || ||||| || || || || ||||| |||||| |||| || | Sbjct 172947 TGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTCTGG 172888 Query 50313 AATCTGCACTTCTGTAC-AAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGG 50371 |||||||||||| | || |||| | || | ||||| ||||| || || || || | Sbjct 172887 AATCTGCACTTCAGCACTGAAATTCTCCA-CCAAATTCTCATTGACAATCCCATCTGAAG 172829 Query 50372 CTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGT---TTAT 50428 | || ||||| || || || | || ||| | |||| || | | | |||| Sbjct 172828 CAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTATTAT 172769 Query 50429 TCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTG 50488 |||| || | ||||||||| || | ||| | |||||| | ||||||||||| || || | Sbjct 172768 TCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGCTTCAG 172709 Query 50489 CCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 50543 | ||| || | |||||| ||||| |||| |||||| || | ||||||||| Sbjct 172708 CACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATCT 172654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718262147035240