Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq627 379 2e-100 >seq627 Length=179744 Score = 379 bits (420), Expect = 2e-100 Identities = 636/901 (71%), Gaps = 19/901 (2%) Strand=Plus/Minus Query 13569 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13628 ||||| || ||||||||| ||| |||||||||||||||||| || ||||||||| | Sbjct 173546 ATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGCT 173487 Query 13629 AGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATAAACAC-TTTATCACAACC 13687 | ||| ||||||||||||||||||||||||||| |||| | | ||| ||| ||| Sbjct 173486 AATGAAATATTTTCCATAAAATCAAATGGATTTGAA-ACATTATAATATTTTTCATTACC 173428 Query 13688 TAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATT 13747 || | | | | |||||||||||||| ||| |||| ||||||| ||| || || ||| Sbjct 173427 TAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATT 173368 Query 13748 CATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAAT-TCTTTTT-CTATAGACACA 13805 |||||||| || ||||| | | || || ||||| ||||||| | ||||| ||| Sbjct 173367 CATACCTAATAAAGAAACAGGCAATGCATC--TTCAAAATATCTTTTTTCAATAGAAACA 173310 Query 13806 GCCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTT--AGATGTTTAA 13863 || || | ||||| || | || | || || | |||||| | ||||| || Sbjct 173309 GCTTCAGTAATAATTCTTTCAGCGATTT--TTGGATCTGGTTTATTTTCCAAATGTTGAA 173252 Query 13864 AAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAA 13923 | | || ||| ||||||||| || || || |||||||||| ||| | ||| ||||||| Sbjct 173251 ATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAA 173192 Query 13924 ATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGG 13983 | || || ||||||||||| || ||| ||||||||||| |||||||||||||| |||| Sbjct 173191 AAGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGG 173132 Query 13984 AAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTT 14043 ||||||| | || ||||| |||||||| || | |||| ||| |||| |||| | || Sbjct 173131 AAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTT 173072 Query 14044 TGT-TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCA 14102 | | || |||||| | |||||||||||| ||||| ||| || || |||||| Sbjct 173071 CATCTTGA-ATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCA 173013 Query 14103 ATAGCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAG 14162 |||||||| || || |||| | ||||| | | | || || ||||| || | ||| Sbjct 173012 ATAGCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCA-AAAG 172954 Query 14163 C-TATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGC 14221 | ||| ||||| || || |||||||| || || || || ||||| ||| |||| Sbjct 172953 CGAATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGC 172894 Query 14222 TTCCGACCATTGTACTTCCG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCAT 14280 ||| | || ||||| | | | |||| | || ||||||| ||||| || || |||| Sbjct 172893 TTCTGGAATCTGCACTTCAGCACTGAAAT-TCTCCACCAAATTCTCATTGACAATCCCAT 172835 Query 14281 CACTAGCTGCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGTTGA 14337 | ||| || |||||||| || | | |||| ||| | || | | |||||| | Sbjct 172834 CTGAAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTC 172775 Query 14338 GTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAG 14397 || ||||| ||| | ||| || |||||||| | ||| || | |||||||| || Sbjct 172774 TATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAG 172715 Query 14398 CGACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATC 14457 | |||| ||| || | ||| ||||| | ||| || ||||| | ||||||| Sbjct 172714 CTTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATC 172655 Query 14458 T 14458 | Sbjct 172654 T 172654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479723556519400