Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq627 369 4e-97
>seq627
Length=179744
Score = 369 bits (408), Expect = 4e-97
Identities = 634/902 (70%), Gaps = 19/902 (2%)
Strand=Plus/Minus
Query 13357 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCC 13416
||||| || ||||||||| ||| ||||||||||||||| || || ||||||||| |
Sbjct 173546 ATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGCT 173487
Query 13417 AGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAAACAC-TTTATCACAACC 13475
| ||| ||||||||||||||||| |||||||||| |||| | | ||| ||| |||
Sbjct 173486 AATGAAATATTTTCCATAAAATCAAATGGATTTGAA-ACATTATAATATTTTTCATTACC 173428
Query 13476 TAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATT 13535
|| | | | |||||||||||||||| ||| |||| ||||||| ||| || || |||
Sbjct 173427 TAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATT 173368
Query 13536 CATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAAT-TCTTTTT-CTATAGACACA 13593
|||||||| || ||||| | | || || ||||| ||||||| | ||||| |||
Sbjct 173367 CATACCTAATAAAGAAACAGGCAATGCATC--TTCAAAATATCTTTTTTCAATAGAAACA 173310
Query 13594 GCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTT--AGATGTTTAA 13651
|| || | ||||| | | | || | || || | |||||| | ||||| ||
Sbjct 173309 GCTTCAGTAATAATTCTTTCAGCGATTT--TTGGATCTGGTTTATTTTCCAAATGTTGAA 173252
Query 13652 AAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAA 13711
| | || ||| ||||||||| || || || |||||||||| ||| | ||| |||||||
Sbjct 173251 ATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAA 173192
Query 13712 ATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGG 13771
| || || ||||||||||| || ||| ||||||||||| |||||||| ||||| ||||
Sbjct 173191 AAGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGG 173132
Query 13772 AAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTT 13831
||||||| | || ||||| |||||||| || | | || ||| |||| |||| | ||
Sbjct 173131 AAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTT 173072
Query 13832 TGT-TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCG 13890
| |||| |||||| | |||||||||||| ||||| ||| || || |||||
Sbjct 173071 CATCTTGA-ATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCA 173013
Query 13891 ATTGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAG 13950
|| |||||||| || ||| | ||||| | | | || || ||||| || | |||
Sbjct 173012 ATAGCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCA-AAAG 172954
Query 13951 C-TATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGC 14009
| ||| ||||| || || ||||| || || || || || ||||||||| ||||
Sbjct 172953 CGAATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGC 172894
Query 14010 TTCTGACCATTGTACCTCCG-AGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCAT 14068
||||| || || || | | | |||| | || |||| || ||||| ||||| ||||
Sbjct 172893 TTCTGGAATCTGCACTTCAGCACTGAAAT-TCTCCACCAAATTCTCATTGACAATCCCAT 172835
Query 14069 CACTAGCTGCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGTTGA 14125
| ||| || |||||||| || | | |||| ||| | || | | |||||| |
Sbjct 172834 CTGAAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTC 172775
Query 14126 GTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAG 14185
|| ||||| ||| | ||| || |||||||| | ||| || | |||||||| ||
Sbjct 172774 TATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAG 172715
Query 14186 CGACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATC 14245
| |||| ||| || | ||| ||||| | ||| || ||||| | |||||||
Sbjct 172714 CTTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATC 172655
Query 14246 TT 14247
||
Sbjct 172654 TT 172653
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478584367071240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |