Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq627 369 4e-97 >seq627 Length=179744 Score = 369 bits (408), Expect = 4e-97 Identities = 634/902 (70%), Gaps = 19/902 (2%) Strand=Plus/Minus Query 13357 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCC 13416 ||||| || ||||||||| ||| ||||||||||||||| || || ||||||||| | Sbjct 173546 ATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGCT 173487 Query 13417 AGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAAACAC-TTTATCACAACC 13475 | ||| ||||||||||||||||| |||||||||| |||| | | ||| ||| ||| Sbjct 173486 AATGAAATATTTTCCATAAAATCAAATGGATTTGAA-ACATTATAATATTTTTCATTACC 173428 Query 13476 TAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATT 13535 || | | | |||||||||||||||| ||| |||| ||||||| ||| || || ||| Sbjct 173427 TAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATT 173368 Query 13536 CATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAAT-TCTTTTT-CTATAGACACA 13593 |||||||| || ||||| | | || || ||||| ||||||| | ||||| ||| Sbjct 173367 CATACCTAATAAAGAAACAGGCAATGCATC--TTCAAAATATCTTTTTTCAATAGAAACA 173310 Query 13594 GCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTT--AGATGTTTAA 13651 || || | ||||| | | | || | || || | |||||| | ||||| || Sbjct 173309 GCTTCAGTAATAATTCTTTCAGCGATTT--TTGGATCTGGTTTATTTTCCAAATGTTGAA 173252 Query 13652 AAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAA 13711 | | || ||| ||||||||| || || || |||||||||| ||| | ||| ||||||| Sbjct 173251 ATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAA 173192 Query 13712 ATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGG 13771 | || || ||||||||||| || ||| ||||||||||| |||||||| ||||| |||| Sbjct 173191 AAGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGG 173132 Query 13772 AAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTT 13831 ||||||| | || ||||| |||||||| || | | || ||| |||| |||| | || Sbjct 173131 AAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTT 173072 Query 13832 TGT-TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCG 13890 | |||| |||||| | |||||||||||| ||||| ||| || || ||||| Sbjct 173071 CATCTTGA-ATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCA 173013 Query 13891 ATTGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAG 13950 || |||||||| || ||| | ||||| | | | || || ||||| || | ||| Sbjct 173012 ATAGCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCA-AAAG 172954 Query 13951 C-TATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGC 14009 | ||| ||||| || || ||||| || || || || || ||||||||| |||| Sbjct 172953 CGAATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGC 172894 Query 14010 TTCTGACCATTGTACCTCCG-AGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCAT 14068 ||||| || || || | | | |||| | || |||| || ||||| ||||| |||| Sbjct 172893 TTCTGGAATCTGCACTTCAGCACTGAAAT-TCTCCACCAAATTCTCATTGACAATCCCAT 172835 Query 14069 CACTAGCTGCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGTTGA 14125 | ||| || |||||||| || | | |||| ||| | || | | |||||| | Sbjct 172834 CTGAAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTC 172775 Query 14126 GTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAG 14185 || ||||| ||| | ||| || |||||||| | ||| || | |||||||| || Sbjct 172774 TATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAG 172715 Query 14186 CGACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATC 14245 | |||| ||| || | ||| ||||| | ||| || ||||| | ||||||| Sbjct 172714 CTTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATC 172655 Query 14246 TT 14247 || Sbjct 172654 TT 172653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478584367071240