Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq506 109 4e-19 seq596 98.7 7e-16 seq631 91.5 1e-13 >seq506 Length=5049 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||||||||| || ||||| || || ||| ||||||||||| || || || Sbjct 1901 ACCACCTCTCAATCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGA 1842 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | |||| ||||||||||| || ||||| ||||| | ||| ||||| | || Sbjct 1841 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 1782 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||||||| ||| ||||| ||| || | ||| || || | | || || Sbjct 1781 GATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGAC 1722 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| |||||||| || ||||| || || || |||||||| Sbjct 1721 TTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCAT 1674 >seq596 Length=25494 Score = 98.7 bits (108), Expect = 7e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||||||||| || ||||| || || ||| ||||||||||| || || || Sbjct 11923 ACCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGA 11982 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | |||| ||||||||||| || ||||| ||||| | ||| ||||| | || Sbjct 11983 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 12042 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||||||| ||| ||||| |||||| || | | || || | | || || Sbjct 12043 AATACCTTCTTTGTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGAC 12102 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAA 44112 || | || || || ||||| ||||| || || ||||| Sbjct 12103 TTCTAGAGTGATAGTCTTACCAGTTAAGGTTTTGACAAA 12141 >seq631 Length=151218 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||||||||| || ||||| || || || ||| ||||| || || || ||| Sbjct 131632 ACCACCTCTCAATCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGA 131573 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 ||| | | || ||||| ||||| || ||||| ||||| | ||| ||||| | || Sbjct 131572 CAATGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGG 131513 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||||| || || || ||||| | | | || |||| | || || Sbjct 131512 AATCCCTTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAAC 131453 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||| || || |||||||||||||| |||||||| Sbjct 131452 TTCCAAAGTGATGGTTTTCCCAGTCAAAGTCTTCACAAAGATTTGCAT 131405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354774396025668