Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq627 297 2e-75
>seq627
Length=179744
Score = 297 bits (328), Expect = 2e-75
Identities = 591/854 (69%), Gaps = 21/854 (2%)
Strand=Plus/Minus
Query 12842 TTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTT 12901
|||| ||||||| ||||||||| || ||||||||||||||| || || |||||
Sbjct 173552 TTTGCCATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTA 173493
Query 12902 CCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACA--ATAGTATTTTT 12959
||| |||| |||||||||||||||||||| || |||||| |||| ||| |||||||
Sbjct 173492 CCTGCTAATGAAATATTTTCCATAAAATCAAATGGATTTGA--AACATTATAATATTTTT 173435
Query 12960 TACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAAT 13019
| |||||| | | || ||||| ||||||||||| || | || || ||||| ||
Sbjct 173434 CATTACCTAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATG 173375
Query 13020 CACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATAT 13079
|| ||||| |||| ||| ||||||| || ||| ||| | ||||||| |||
Sbjct 173374 CAGCATTCATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAG 173315
Query 13080 CAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTA-ATGGAGGATTTGATAGATGC 13138
||| ||||| ||| || ||| | | || | | ||| |||| | |||
Sbjct 173314 AAACAGCTTCAGTAA-TAATTCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGT 173256
Query 13139 TTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTT 13198
| ||| | | ||||||||||||| ||| | ||||||||||||| || | || |||
Sbjct 173255 TGAAATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTT 173196
Query 13199 GAAAATGTTAGACCCGGCAT-AAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGA 13257
||||| || | ||| ||||| || |||| || ||||| |||||| || |||||||| ||
Sbjct 173195 GAAAAAGTCAAACCTGGCATCAACCCCTTTTTCTTTAA-CCAAAAAATTGCAGCAAATGA 173137
Query 13258 ACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACT 13317
||| ||||| || | |||||||| || ||||| || | ||| |||||| || | || |
Sbjct 173136 ACCGGAAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAA--TAAT 173079
Query 13318 --ATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATA 13375
|| || | | ||||| | | ||||| | ||||||| ||| | |||
Sbjct 173078 GCATCTTCATCTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATA 173019
Query 13376 TTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATC 13435
|||| || || || || || | | |||| || ||| ||||||||||| |||
Sbjct 173018 GTTTCAATAGCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATC 172959
Query 13436 AATAAGC-TATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACA 13494
|| |||| ||| |||| ||| |||||||||||| |||||||| || ||||||||
Sbjct 172958 AA-AAGCGAATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACA 172900
Query 13495 TCTAGCCTCTGATACCTGAACTTC-GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTA 13553
| |||| |||| | ||| ||||| | | | |||| | || | || || || || || |
Sbjct 172899 TTTAGCTTCTGGAATCTGCACTTCAGCACTGAAAT-TCTCCACCAAATTCTCATTGACAA 172841
Query 13554 TCCCGTCACTAGCAGCaaaaaaaGC-AAGTATGTGCTTAATAAAttttttttCGTTTTCT 13612
|||| || |||||| ||||| || || | | | |||| || | |||| |||||
Sbjct 172840 TCCCATCTGAAGCAGCGAAAAATGCTAAAACTCTAC-TAATGAAAAATCTTTCATTTTCA 172782
Query 13613 GACA-ACT-TTA-ACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAA 13669
|| || ||| ||| || | | |||||| || | ||| | || || | ||||||
Sbjct 172781 TTCATTCTATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAA 172722
Query 13670 AAAGAAGCAACAGC 13683
|| ||||| ||||
Sbjct 172721 AATGAAGCTTCAGC 172708
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430978507824882
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |