Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq627 297 2e-75 >seq627 Length=179744 Score = 297 bits (328), Expect = 2e-75 Identities = 591/854 (69%), Gaps = 21/854 (2%) Strand=Plus/Minus Query 12842 TTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTT 12901 |||| ||||||| ||||||||| || ||||||||||||||| || || ||||| Sbjct 173552 TTTGCCATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTA 173493 Query 12902 CCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACA--ATAGTATTTTT 12959 ||| |||| |||||||||||||||||||| || |||||| |||| ||| ||||||| Sbjct 173492 CCTGCTAATGAAATATTTTCCATAAAATCAAATGGATTTGA--AACATTATAATATTTTT 173435 Query 12960 TACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAAT 13019 | |||||| | | || ||||| ||||||||||| || | || || ||||| || Sbjct 173434 CATTACCTAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATG 173375 Query 13020 CACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATAT 13079 || ||||| |||| ||| ||||||| || ||| ||| | ||||||| ||| Sbjct 173374 CAGCATTCATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAG 173315 Query 13080 CAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTA-ATGGAGGATTTGATAGATGC 13138 ||| ||||| ||| || ||| | | || | | ||| |||| | ||| Sbjct 173314 AAACAGCTTCAGTAA-TAATTCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGT 173256 Query 13139 TTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTT 13198 | ||| | | ||||||||||||| ||| | ||||||||||||| || | || ||| Sbjct 173255 TGAAATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTT 173196 Query 13199 GAAAATGTTAGACCCGGCAT-AAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGA 13257 ||||| || | ||| ||||| || |||| || ||||| |||||| || |||||||| || Sbjct 173195 GAAAAAGTCAAACCTGGCATCAACCCCTTTTTCTTTAA-CCAAAAAATTGCAGCAAATGA 173137 Query 13258 ACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACT 13317 ||| ||||| || | |||||||| || ||||| || | ||| |||||| || | || | Sbjct 173136 ACCGGAAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAA--TAAT 173079 Query 13318 --ATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATA 13375 || || | | ||||| | | ||||| | ||||||| ||| | ||| Sbjct 173078 GCATCTTCATCTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATA 173019 Query 13376 TTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATC 13435 |||| || || || || || | | |||| || ||| ||||||||||| ||| Sbjct 173018 GTTTCAATAGCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATC 172959 Query 13436 AATAAGC-TATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACA 13494 || |||| ||| |||| ||| |||||||||||| |||||||| || |||||||| Sbjct 172958 AA-AAGCGAATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACA 172900 Query 13495 TCTAGCCTCTGATACCTGAACTTC-GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTA 13553 | |||| |||| | ||| ||||| | | | |||| | || | || || || || || | Sbjct 172899 TTTAGCTTCTGGAATCTGCACTTCAGCACTGAAAT-TCTCCACCAAATTCTCATTGACAA 172841 Query 13554 TCCCGTCACTAGCAGCaaaaaaaGC-AAGTATGTGCTTAATAAAttttttttCGTTTTCT 13612 |||| || |||||| ||||| || || | | | |||| || | |||| ||||| Sbjct 172840 TCCCATCTGAAGCAGCGAAAAATGCTAAAACTCTAC-TAATGAAAAATCTTTCATTTTCA 172782 Query 13613 GACA-ACT-TTA-ACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAA 13669 || || ||| ||| || | | |||||| || | ||| | || || | |||||| Sbjct 172781 TTCATTCTATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAA 172722 Query 13670 AAAGAAGCAACAGC 13683 || ||||| |||| Sbjct 172721 AATGAAGCTTCAGC 172708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430978507824882