Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq602 125 9e-24
seq671 109 7e-19
seq580 93.3 5e-14
>seq602
Length=60854
Score = 125 bits (138), Expect = 9e-24
Identities = 257/378 (68%), Gaps = 18/378 (5%)
Strand=Plus/Minus
Query 164604 TAAAATTGTTAATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGT 164663
|||||||||||||||||||||| | |||| ||||| || ||| || || | ||| |
Sbjct 13061 TAAAATTGTTAATGGTCCTGAAATTTTGAGTAAATACGTGGGTTCCTCTGAGGAAAATAT 13002
Query 164664 TAGAAAGTTGTTTCAGGAGGCTGAAGAAGAACAAAA---GAAAGCAGGTTTAGCTAGTAA 164720
|||||| |||||| |||| || || | |||| | || ||||| || || |||
Sbjct 13001 TAGAAATTTGTTTAAGGACGCAGAGGCAGAATACAAAGCGAAAGGAGA---AGAAAGTTC 12945
Query 164721 ATTACATGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAA--AAA-------ACGTGG 164771
|| ||| |||| |||||||||| | || || | | ||| ||| | | ||
Sbjct 12944 CTTGCATATTATCATTTTTGATGAATTGGACTCTGTCTTCAAGCAAAGAGGGTCAAGAGG 12885
Query 164772 TGATAATATTATTCATGATG-CAGTG--GTTAATCAGTTGCTTTCTAAAATAGATGGTGT 164828
|||| || || || || || || ||||| ||| | | ||||| ||||||||
Sbjct 12884 TGATGGTACAGGGGTTGGTGACAATGTTGTCAATCAATTGTTAGCCAAAATGGATGGTGT 12825
Query 164829 AGAATCCTTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGA 164888
|| ||||| || ||||| || | ||||||||||| || ||||| || ||| |
Sbjct 12824 TGATCAGTTAAACAACATTTTGGTTATTGGTATGACCAATCGTAGAGATTTGATCGATAA 12765
Query 164889 TGCTTTATTACGACCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGA 164948
|| ||||| |||||||| |||| ||| | || | ||||| || || || ||||
Sbjct 12764 CGCGTTATTGAGACCTGGTAGATTTGAAGTTCAAGTGGAAATCAAGTTGCCAGATGAAGA 12705
Query 164949 AGGACGCCTTCAAATTTT 164966
||| | || ||||||||
Sbjct 12704 AGGTAGACTACAAATTTT 12687
>seq671
Length=59753
Score = 109 bits (120), Expect = 7e-19
Identities = 297/449 (66%), Gaps = 23/449 (5%)
Strand=Plus/Plus
Query 6807 TAATTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATG 6866
|| ||||||||| | ||| | | |||||| ||||| ||||| || || | || ||
Sbjct 42773 TATTTGTTCTTTCAAAGCGTCAACGTGATCTTTATAAACGTGAGCGTCCCCCAAAGTGTG 42832
Query 6867 AATAAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATA 6926
||||||||||| || | ||||||| | ||| ||||| | | || || ||||||||
Sbjct 42833 GATAAATTCACCAGGATCCATATCACAAACTTTGGCAATCATCTTGGTCAACAATGCATA 42892
Query 6927 AGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATA-ACATTG-A 6984
|| || | || || || || ||||| ||||| || |||||||| || | | | |
Sbjct 42893 GGATGCGATGTTGAATGGAACTCCTAAACCCATGTCGCAGGATCTTTGGTATAGAACGCA 42952
Query 6985 C--AAGATAA--AATATTGTCTA------TAG---------CATAAAATTGACACAATAC 7025
| ||| | | | | | || ||| |||||||||||| || ||
Sbjct 42953 CGAAAGTTTAGGACGAGCGCCTTCCTCCTTAGGAAAACTCACATAAAATTGACTGAAGAC 43012
Query 7026 ATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAAT 7085
|||||| || || ||| | | | | ||| | |||||||||||| | | | |||
Sbjct 43013 ATGACAAGGTGGCAAAGCCATTTTTTTGAAATCTGGAGGATTCCAAGCACTTAAGATAAT 43072
Query 7086 ACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAA-TTGATCTATAC 7144
| ||| || | || || ||| | ||| ||| | | | | || |||||| |
Sbjct 43073 TCTTCTGTCGTAAGGGTTATGTTTCAGTTTATATATGACT-TCAGCAAGTTGATCGTAGC 43131
Query 7145 CCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAA 7204
|||| || ||||| || | ||| | | || | ||||||||||||||||| ||||
Sbjct 43132 CCTGGCCATCATAGTTGTCGTCACATGTCTTGTATTCTGCTCCAAAATGTCTCCACTGAA 43191
Query 7205 ACCCATAAATAGGACCTAAATCACCTTCT 7233
||||||||| |||||| | ||||||||||
Sbjct 43192 ACCCATAAACAGGACCAAGATCACCTTCT 43220
>seq580
Length=59395
Score = 93.3 bits (102), Expect = 5e-14
Identities = 126/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 19328 GTTAAAATTAAATTAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTT 19387
|||||| ||| | | ||| || | ||| | || |||| ||||| |||||||| ||
Sbjct 5892 GTTAAAGTTAGAGTTAGAACTACCAAAGTGCCGCAAATTGGTGACAAGTTTGCCTCCAGA 5951
Query 19388 ACTGCTCAAAAAGGCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAA 19447
| ||||||||| || |||||| | ||| | |||||||||||| ||||| |
Sbjct 5952 CACGGTCAAAAAGGTACCATTGGTATCACATATAGAAGAGAAGATATGCCATTTACGGCA 6011
Query 19448 GATGGTATAGTGCCGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503
|| ||||| || || ||| | || || |||||||| ||| ||||| ||| |||||
Sbjct 6012 GAAGGTATTGTTCCTGATTTGATCATCAACCCACACGCTATTCCATCTCGTATGAC 6067
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595866480735600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |