Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq631 143 2e-29 seq596 132 4e-26 seq506 129 5e-25 >seq631 Length=151218 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||| |||||||| | || || |||||||| | ||| || ||| | Sbjct 131631 CCACCTCTCAATCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGAC 131572 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || || || |||| |||||| || |||| || |||||||| || || || ||| Sbjct 131571 AATGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGA 131512 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||||||||| | || || | ||||||| | ||| ||||| | | || || Sbjct 131511 ATCCCTTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACT 131452 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||||||||||| ||||| | ||| ||||||||||| ||||| Sbjct 131451 TCCAAAGTGATGGTTTTCCCAGTCAAAGTCTTCACAAAGATTTGCAT 131405 Score = 140 bits (154), Expect = 3e-28 Identities = 172/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || || |||||||||| ||| |||||||| | || || |||||||| | ||| | Sbjct 131411 TTTGCATCCCACCTCTCAATCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGT 131352 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 | ||| || || || || |||| |||||| || |||| || |||||||| || | Sbjct 131351 AGTCGGACAACGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGT 131292 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 | || ||||| ||||||||||| | || || | ||||||| | ||| ||||| | | Sbjct 131291 CAGGTGGAATCCCTTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGG 131232 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | ||||||||||| ||||| | |||||| ||||| || ||||| Sbjct 131231 ATTCAACTTCCAAGGTGATGGTTTTCCCAGTCAAAGTTTTAACAAAAATTTGCAT 131177 >seq596 Length=25494 Score = 132 bits (146), Expect = 4e-26 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 94778 ACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCG 94837 || || |||||||||| ||| |||||||| | ||| ||||| ||||| | ||| || || Sbjct 11921 ACACCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCA 11980 Query 94838 CTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGA 94897 || ||| | ||| |||| ||||| || ||||||| |||||||| || || || Sbjct 11981 GACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 12040 Query 94898 GGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCG 94957 ||||||||||||||||| | ||||| || |||||| ||| ||||| | | ||| Sbjct 12041 GGAATACCTTCTTTGTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCG 12100 Query 94958 ACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998 || || | ||||| || || ||||| | ||||| ||||| Sbjct 12101 ACTTCTAGAGTGATAGTCTTACCAGTTAAGGTTTTGACAAA 12141 >seq506 Length=5049 Score = 129 bits (142), Expect = 5e-25 Identities = 171/236 (72%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 94772 TTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTA 94831 |||||| | || |||||||||| ||| |||||||| | || ||||| ||||| | ||| Sbjct 1908 TTTTAC-CACCACCTCTCAATCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTG 1850 Query 94832 TAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGA 94891 || || || ||| | ||| |||| ||||| || ||||||| |||||||| || Sbjct 1849 TAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGG 1790 Query 94892 TCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCG 94951 || || || |||||||||||||| | ||||| || || || | | | ||||||| | Sbjct 1789 TCAGGTGGGATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTGTCAATGGTGTCAGAG 1730 Query 94952 TGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || | || |||||||| || || | |||||| || || || ||||| Sbjct 1729 GATTCGACTTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCAT 1674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448287047702760