Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq627 279 5e-70
>seq627
Length=179744
Score = 279 bits (308), Expect = 5e-70
Identities = 630/938 (67%), Gaps = 25/938 (3%)
Strand=Plus/Minus
Query 21166 TTTTGACATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTT 21225
||||| ||||| || ||||||||||||| |||||||||||| || ||||| || ||
Sbjct 173553 TTTTGCCATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTT 173494
Query 21226 TCCTTCCAATGATATAGATTCCATAAAATCAAATGGATTTTCAGATTTA-AATATTTTAT 21284
||| | ||||| ||| |||||||||||||||||||||| | ||| |||||||| |
Sbjct 173493 ACCTGCTAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTT-T 173435
Query 21285 TACAACCCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATT 21344
| ||| | | | ||||||||||| || |||||||| | ||||||| ||| |||
Sbjct 173434 CATTACCTAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATG 173375
Query 21345 CACAATTCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTT-CTATA 21403
|| ||||||||| | || ||||| | || | | |||||| | ||||| | |||
Sbjct 173374 CAGCATTCATACCTAATAAAGAAACAGGCAATGCATCT-TCAAAATATCTTTTTTCAATA 173316
Query 21404 GAGACGGCTTCAACAATTATATTTATTATCCTAGATGTACTAGG----GGGATACAAT-- 21457
|| || |||||| ||| || || || ||| | | || || || |
Sbjct 173315 GAAACAGCTTCAGTAATAATTCTT----TCAGCGATTT--TTGGATCTGGTTTATTTTCC 173262
Query 21458 AATTGTTTAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAAT 21517
|| |||| ||| | | ||||||||||||| || | |||||||| |||| || |||
Sbjct 173261 AAATGTTGAAATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAAT 173202
Query 21518 TCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCA 21577
||||| ||||| || ||||| ||||| || || | || ||||||||||| |||| |||
Sbjct 173201 TCATTTGAAAAAGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCA 173142
Query 21578 AATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTAT 21637
|||| || |||||||||| || ||||| ||||||||||| || |||| |||| | ||
Sbjct 173141 AATGAACCGGAAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAAT 173082
Query 21638 GTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCA 21697
| |||| ||| |||||| | ||||||| || |||||||| || |
Sbjct 173081 AATGCATCTTCATCTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGA 173022
Query 21698 ATTGTATCAATAGCTTTTAA-AAGATGAtt-tttttCATCTACATCGGTTATGNNNNNNN 21755
|| || |||||||| || || |||| ||| |||| | | ||| | ||
Sbjct 173021 ATAGTTTCAATAGCATTGAACAAGA--ATTCACTTTCTTTTGGATCTTTGATATAAGTAT 172964
Query 21756 NNNNNNNNNNACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAA 21815
||| ||||| ||| |||||||| ||| || || || |||||||
Sbjct 172963 CGATCAAAAGCGAATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAA 172904
Query 21816 AACATCTTGCCTCTGAACATTGAACCTC-GGAATAAAATCGTTGAGCCAAGTTTTCATTT 21874
||||| | || |||| | || || || | | | |||| | | |||| || |||||
Sbjct 172903 AACATTTAGCTTCTGGAATCTGCACTTCAGCACTGAAATTCTCCA-CCAAATTCTCATTG 172845
Query 21875 ACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTA 21934
|| || ||||| || || |||||||| || | | | || ||| ||| ||| ||
Sbjct 172844 ACAATCCCATCTGAAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTT 172785
Query 21935 TCTGTTAAT---TTTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTC 21991
|| | | | || ||||| || | |||||| || | ||| | |||||| | |||
Sbjct 172784 TCATTCATTCTATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTC 172725
Query 21992 CAAAAGCTAGCAATAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAAT 22051
||||| ||| ||| ||| || |||||| |||| ||| | ||||||||
Sbjct 172724 CAAAATGAAGCTTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAAC 172665
Query 22052 ATTACAAACCTGTTATTTGATTCAACTAAAAGTGGTTC 22089
| ||||| || | || ||| || || || |||||
Sbjct 172664 AAAACAAATCTTCTTTTGTTTTCCACCAATAGCGGTTC 172627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531895873268840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |