Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq627 279 5e-70 >seq627 Length=179744 Score = 279 bits (308), Expect = 5e-70 Identities = 630/938 (67%), Gaps = 25/938 (3%) Strand=Plus/Minus Query 21166 TTTTGACATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTT 21225 ||||| ||||| || ||||||||||||| |||||||||||| || ||||| || || Sbjct 173553 TTTTGCCATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTT 173494 Query 21226 TCCTTCCAATGATATAGATTCCATAAAATCAAATGGATTTTCAGATTTA-AATATTTTAT 21284 ||| | ||||| ||| |||||||||||||||||||||| | ||| |||||||| | Sbjct 173493 ACCTGCTAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTT-T 173435 Query 21285 TACAACCCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATT 21344 | ||| | | | ||||||||||| || |||||||| | ||||||| ||| ||| Sbjct 173434 CATTACCTAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATG 173375 Query 21345 CACAATTCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTT-CTATA 21403 || ||||||||| | || ||||| | || | | |||||| | ||||| | ||| Sbjct 173374 CAGCATTCATACCTAATAAAGAAACAGGCAATGCATCT-TCAAAATATCTTTTTTCAATA 173316 Query 21404 GAGACGGCTTCAACAATTATATTTATTATCCTAGATGTACTAGG----GGGATACAAT-- 21457 || || |||||| ||| || || || ||| | | || || || | Sbjct 173315 GAAACAGCTTCAGTAATAATTCTT----TCAGCGATTT--TTGGATCTGGTTTATTTTCC 173262 Query 21458 AATTGTTTAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAAT 21517 || |||| ||| | | ||||||||||||| || | |||||||| |||| || ||| Sbjct 173261 AAATGTTGAAATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAAT 173202 Query 21518 TCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCA 21577 ||||| ||||| || ||||| ||||| || || | || ||||||||||| |||| ||| Sbjct 173201 TCATTTGAAAAAGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCA 173142 Query 21578 AATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTAT 21637 |||| || |||||||||| || ||||| ||||||||||| || |||| |||| | || Sbjct 173141 AATGAACCGGAAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAAT 173082 Query 21638 GTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCA 21697 | |||| ||| |||||| | ||||||| || |||||||| || | Sbjct 173081 AATGCATCTTCATCTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGA 173022 Query 21698 ATTGTATCAATAGCTTTTAA-AAGATGAtt-tttttCATCTACATCGGTTATGNNNNNNN 21755 || || |||||||| || || |||| ||| |||| | | ||| | || Sbjct 173021 ATAGTTTCAATAGCATTGAACAAGA--ATTCACTTTCTTTTGGATCTTTGATATAAGTAT 172964 Query 21756 NNNNNNNNNNACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAA 21815 ||| ||||| ||| |||||||| ||| || || || ||||||| Sbjct 172963 CGATCAAAAGCGAATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAA 172904 Query 21816 AACATCTTGCCTCTGAACATTGAACCTC-GGAATAAAATCGTTGAGCCAAGTTTTCATTT 21874 ||||| | || |||| | || || || | | | |||| | | |||| || ||||| Sbjct 172903 AACATTTAGCTTCTGGAATCTGCACTTCAGCACTGAAATTCTCCA-CCAAATTCTCATTG 172845 Query 21875 ACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTA 21934 || || ||||| || || |||||||| || | | | || ||| ||| ||| || Sbjct 172844 ACAATCCCATCTGAAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTT 172785 Query 21935 TCTGTTAAT---TTTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTC 21991 || | | | || ||||| || | |||||| || | ||| | |||||| | ||| Sbjct 172784 TCATTCATTCTATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTC 172725 Query 21992 CAAAAGCTAGCAATAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAAT 22051 ||||| ||| ||| ||| || |||||| |||| ||| | |||||||| Sbjct 172724 CAAAATGAAGCTTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAAC 172665 Query 22052 ATTACAAACCTGTTATTTGATTCAACTAAAAGTGGTTC 22089 | ||||| || | || ||| || || || ||||| Sbjct 172664 AAAACAAATCTTCTTTTGTTTTCCACCAATAGCGGTTC 172627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531895873268840