Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq664 399 3e-106 seq627 300 2e-76 >seq664 Length=41649 Score = 399 bits (442), Expect = 3e-106 Identities = 1459/2253 (65%), Gaps = 77/2253 (3%) Strand=Plus/Minus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 || || || |||| ||| || || | || || | | |||||||| || ||||| | | Sbjct 34915 GTAAACTGGATGGCAGCAGAAGCAGCTTGGGTTCTCAAGTAGTACATCCCTGTTTTCAAA 34856 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC-TGCTA 62112 || | ||| ||||| |||||||| || ||||| || | || | || | Sbjct 34855 CCTTTAGACCACCCGTAGAAATGCATGGAGGTCAGTTTCCCCATTGTTGGGGCCATG--A 34798 Query 62113 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62172 | |||||||| | ||| ||| |||||| ||||| || ||||| |||||||| | | Sbjct 34797 TGTGGATATTTAGAGAGTGAGATTGATCAATGAAAGCGGATCTGTCAGCAGCCATGTCGA 34738 Query 62173 TGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 62231 ||||||||||||| | | |||||||| ||||| || || || | ||| |||| ||| Sbjct 34737 TGATCGTCTTTTGAGACAATTCCCAAACTGTTTTGTACAAGTCTTTCAAT-TCTTGAGGA 34679 Query 62232 AGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCA 62288 | ||||| | |||||||| || | || || || | || || |||| Sbjct 34678 ATGTTTGGCAAGTGTTGAATGGACCCGTTGTTGGCAATGATGTTTGATTTCATAGCATCG 34619 Query 62289 TTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 62347 ||||| ||| | || ||| |||| || | | ||||| || | ||| ||||| Sbjct 34618 TTCCA-AATGCCCAAATCAACCAAATCTCTTAGCAAGTATGGATTGACAATTTGGAATTC 34560 Query 62348 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATT 62407 |||||||| ||| | || ||| || || || | ||||| | | || || | Sbjct 34559 ACCAGACAACGTTCTTCTAGAGTACATGTTTGAAGTGAATGGTTCGAAACATTCGTTGTA 34500 Query 62408 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 62467 ||||| ||||| | |||||||| || ||||| || |||| || || ||||| | Sbjct 34499 ACCCAAGATTTGCGATGTTGATGCTGTTGGCATTGGAGCCAATAACAATGAGTTTCTCAA 34440 Query 62468 ACC-GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 62526 || || | | ||||| ||| | | || |||||| | ||| | ||| | || | Sbjct 34439 TCCAGTTTCCACA-ATTTTTTCTCTCAAAGATTCCCATTCCCACAAATCAGTTGGAGCTC 34381 Query 62527 CNNNNNNNNNNNNNNNTTGTAGAATACC--GTTA--CTGGCGTACGATCCTACATATGTA 62582 ||| | || ||| || | |||| | || | | | || Sbjct 34380 TATCCCACATGTCAAATTGCAAAACACCTTGTGAAGCTGGTGAACCTTGGAA-AGAT--- 34325 Query 62583 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 62642 | |||||| ||||| | | | || | ||| | || |||||| | | || | Sbjct 34324 TGGTATGGACCTTCTTCCACGGCCATTTCGTTTGAAGATTCCAATGCAGCATGGTACAAT 34265 Query 62643 GTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAG 62702 |||||||| || | |||| || | || |||| | |||||||||| | || Sbjct 34264 GTTTCGAAAATTTGAATATTCAGTTGTTTGGCTTGTTCGGAATCAAATGGAATTCTCAAA 34205 Query 62703 AGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 62762 || ||||| | || || || ||||||||||||| | |||||||| |||||| |||| Sbjct 34204 AGCATAAAAGTATCAGCCAAACCTTGAACACCAAGGGCAATAGGTCTGTGTCTCATATTT 34145 Query 62763 GAGATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 62819 ||| || ||| ||| | ||| |||||||| | || || | | | || | |||| Sbjct 34144 GAGTTTCTTGCAGTTTCC---ACAGGGTAATAATTTCTGTCAATGACTCTGTTCAAATTT 34088 Query 62820 CTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---------TCGCCCA 62870 || ||| ||||| | ||||| | | ||| | |||||| | | | ||| Sbjct 34087 CTTGTAATGACTTTTGCAACATCGTGTAATTTTTGGAAATCATAAGTTTGTTGTTGACCA 34028 Query 62871 TCTATTACAAACAT----------GTTCAAGGCAACAGATGCCAGATTACAAACGGC--- 62917 ||| | |||||| | ||| |||| ||| |||| ||||||||| || Sbjct 34027 TCTTCTG-AAACATTGATGAAAGCGGGCAAAGCAATAGAAGCCAAATTACAAACAGCAGT 33969 Query 62918 TACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGT 62977 | | || ||| || | ||||| | || ||| || | |||| | |||||||| Sbjct 33968 TTCGTCGTTA---TCTGAATATTCCACAATTTCACAACACAAATTAGATGATTTGATAGT 33912 Query 62978 TCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGT 63037 ||||||||||| ||||||| ||||||||||| ||||| || |||| ||| ||||| || Sbjct 33911 TCCTAAATTTTTTTGATTAGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGT 33852 Query 63038 ACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGA 63097 ||| |||||| | || | ||| | || || | ||| | | | || |||| |||| Sbjct 33851 ACCTGTTTCAGTTTGTGCTTCCAAGATAGCATACCATAATTTTTGTGC-TTTA--ATAGT 33795 Query 63098 TTTG-TATCTCCT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCA 63154 ||| || ||| | |||| | ||| | |||||| ||| || || | || | Sbjct 33794 TTTTCTACCTCTTCCTTCTGAAACATATCTATTGTACAATTTTTCAAAATCTGCACCATA 33735 Query 63155 AACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTT 63214 ||||| || || ||| |||| ||| | | ||| | ||| ||| | || || Sbjct 33734 AACATCACTTAAACCTGGAGCTTCACTTGGAGAAAACAATGTCCAATCTGAATTTTCTTT 33675 Query 63215 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 63274 ||| || |||||| | ||| |||| ||| | || ||| | |||||| | |||| Sbjct 33674 AACTTTTTGCATAAATAAATCTGGAACCCATAATGCAGGAAACAAATCTCTTGCTCTAAT 33615 Query 63275 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63334 ||| || || || ||| || || ||| | || | | ||||||| |||||| || Sbjct 33614 TTCTTCTTTACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATGCCATGG 33555 Query 63335 TTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 63394 ||| || || | || | | | ||||| | ||| || || || ||||| | ||||| || Sbjct 33554 TTCTAAATAAAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTTGC 33495 Query 63395 GGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGA 63454 || ||||| ||||||| | ||||||||| | || || || | ||||| ||||| | Sbjct 33494 AGTATTATTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTCCCATTAGTACCTGC 33435 Query 63455 GATATAGCTTCCACTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTT 63513 ||||| || | | | ||||||| ||| ||| ||||| || || || || ||| Sbjct 33434 AATATAAGAACCGGTTGATCTAATATTATGAATATGA-AGACCAATACCACCAGCAGTTT 33376 Query 63514 TAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCA 63573 |||| || || || ||| |||||| || ||||| ||||| || ||| ||| || ||| Sbjct 33375 TAGAAATCAAAGCACATTCTTTTAAAGTATCATAAATACCATCAATGGAATCGTCTTTCA 33316 Query 63574 TGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAG 63633 | || || ||||| ||||||||| | | ||||| ||||| ||||| || | Sbjct 33315 TAGCAACAAGGAAACATGAAGACATTTGAGGTCTTGGTGTTCCAGCATTGAATAAAGTTG 33256 Query 63634 GAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTA 63693 |||| || || || || || | ||| | | ||| || || || | || || | Sbjct 33255 GAGATGCATGTGTGAAATATCTCAAAGACATCAAATTATAAGTTTCCAAGACTTTTTCAA 33196 Query 63694 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 63753 |||| | |||||| || || || || | ||| | || || |||||||||||| | | Sbjct 33195 TATCTGAACCATGAATCCCGACAGCAACTCTCATGATCAAATGTTGAGGTCTTTCAGCAA 33136 Query 63754 TCTTGTTGTTT-ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 63812 | |||| || ||| | || || || ||| ||||||| ||||| ||||||||||| || Sbjct 33135 T-TTGTCCATTGATTCTTAATAAATACGATCTTTCCAATGTTTTGAAACCAAAATAATTA 33077 Query 63813 TATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACT 63872 ||| || |||| || |||| |||| | || | ||| |||| ||| | || Sbjct 33076 TATTGGAAATCTCTATCATAAACAATAGCACTATTTAAAACATCTTTATTTTTTTCTACA 33017 Query 63873 ATAT--CCATGGTGAT-ACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACA 63929 || | | || || ||| ||| || ||||| | | |||||||| ||||||| Sbjct 33016 ATTTGATAAACGTCATCACT---AATCATTGGAGATTTTAATCCATTTTTTTCATTAACA 32960 Query 63930 TAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTT 63989 || ||||||| || |||| | |||| ||||||| |||| || |||| ||| Sbjct 32959 TAAAAATATAAATCTGAAATGACTTGAGAAAATTGTTTTTTAGTTTGTTTATGTAAATTA 32900 Query 63990 GATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG--TTGT-GTAGTACAAGTG 64046 || | || ||||| || || | | |||||||| ||||| | || || || || Sbjct 32899 GAAATAGCAATTCTTGCAGCCAATGTAGCATAATCAGGATGAATAGTGGTCATATAA--- 32843 Query 64047 GCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCT 64106 || | |||| || |||| | | |||||||| | || || || || | ||| | || Sbjct 32842 GCACATGTTTCAGCAGCCAAATTATCCAATTCAATAGTAGTAACACCTTCATAAACACCA 32783 Query 64107 TGAATAA-CCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAACA 64165 |||| ||| | | || || |||||| ||||| | | | ||| |||||||| Sbjct 32782 GATATAATTCTTTGT-GTAATAGAAACAGGATCAATATGGTTTGGATCTAAACCATAACA 32724 Query 64166 TAATTTTCTAATACGAGACGTGATTTTATCAAA 64198 |||| | ||| | ||| |||||||||||||| Sbjct 32723 TAATCTAGCAATTCTAGAAGTGATTTTATCAAA 32691 >seq627 Length=179744 Score = 300 bits (332), Expect = 2e-76 Identities = 606/896 (68%), Gaps = 10/896 (1%) Strand=Plus/Minus Query 33000 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33059 |||||| || |||||| || ||| || | |||||| || ||||| ||||| ||| | Sbjct 173547 CATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGC 173488 Query 33060 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 33119 ||||| ||||||||||| |||||||| ||||| | |||||||||| ||||| | || Sbjct 173487 TAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCATTACC 173428 Query 33120 CAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATT 33179 ||| || | |||||||| || || ||||| | |||| ||||||| | || ||| Sbjct 173427 TAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATT 173368 Query 33180 CATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGC 33239 ||| |||| | ||| || | || | || | || || |||||| || || || Sbjct 173367 CATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACAGC 173308 Query 33240 ATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACAT 33299 || || ||||| | | || ||| | | ||| || ||||||| ||| | Sbjct 173307 TTCAGTAATAATTCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAATAA 173248 Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359 | |||||| ||||| ||| || || || ||||||| ||| | ||| || ||||| || Sbjct 173247 TAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAAGT 173188 Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419 | || ||||| | || || || | |||||| || | ||| ||||| || ||||| Sbjct 173187 CAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAAAA 173128 Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATG 33479 ||| | ||||| || |||||||| || | | ||| || || | || |||| Sbjct 173127 GAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCATC 173068 Query 33480 T---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 33536 | ||||| | |||||| || || || | ||| | || || ||||| || || Sbjct 173067 TTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATAGC 173008 Query 33537 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 33596 ||| || | | | |||| || |||||| | |||||||||||||||||| ||| Sbjct 173007 ATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGCGAATA 172948 Query 33597 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33656 |||| ||| || ||||| || || || || ||||| |||||| |||| || | Sbjct 172947 TGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTCTGG 172888 Query 33657 AATCTGTACTTCTGTAC--AAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTG 33714 |||||| ||||| | || ||| || ||| ||||||| ||||| || || || || Sbjct 172887 AATCTGCACTTCAGCACTGAAATTC--TCCACCAAATTCTCATTGACAATCCCATCTGAA 172830 Query 33715 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTA 33771 || || ||||| || || || | || ||| || |||| | | | | | ||| Sbjct 172829 GCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTATTA 172770 Query 33772 TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCT 33831 ||||| || | ||||||||| || | ||| | |||||| | ||||||||||| || || Sbjct 172769 TTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGCTTCA 172710 Query 33832 GCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCT 33887 || ||| || | |||||| |||| |||| |||||| || | ||||||||| Sbjct 172709 GCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATCT 172654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622941429951560