Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq596 123 2e-23
seq506 122 7e-23
seq631 118 9e-22
>seq596
Length=25494
Score = 123 bits (136), Expect = 2e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059
||||| ||||| |||||||| || | || || | |||||||| || ||||||||||
Sbjct 12141 TTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCATC 12082
Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119
|| | |||||| || || ||||||||||| || || || || ||||| ||| ||
Sbjct 12081 GATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 12022
Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179
|| | | || || ||| | ||||||| |||| | || || ||||||||||||
Sbjct 12021 ATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 11962
Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||| || |||| || || || ||||||||||| ||
Sbjct 11961 GAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 11924
>seq506
Length=5049
Score = 122 bits (134), Expect = 7e-23
Identities = 168/235 (71%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 23983 CAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCG 24042
|| |||| |||||| | || || ||||| || || || ||| | |||||| | |||||||
Sbjct 1666 CAGACAAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCG 1725
Query 24043 AGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTC 24102
| || |||||||| || | || ||| || || ||||||||||| || || |
Sbjct 1726 AATCCTCTGACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCAC 1785
Query 24103 CCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCG 24162
| || ||||| ||| |||| | | || || ||| | ||||||| |||| | |
Sbjct 1786 CTGACCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTG 1845
Query 24163 ATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
| || ||||||||||||||||| || |||| || || || ||||||||||| ||
Sbjct 1846 ACTACAACATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGG 1900
>seq631
Length=151218
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047
||||||||| | ||||| ||||| || ||||| ||| | || ||| | ||||| || ||
Sbjct 131174 AAAATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACCTTGGAAGTTGAATCC 131233
Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107
||||||||||| | ||||| ||||| ||||||||||| || || || ||
Sbjct 131234 TCAGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGAC 131293
Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167
||||| ||| |||||| | || || || | ||||| | ||||| | ||| ||
Sbjct 131294 CAACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCGACTAC 131353
Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||| ||||| || || || | || || || || ||||||||||| ||
Sbjct 131354 AACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 131403
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| || || || ||||| ||| | || || | ||||| || ||
Sbjct 131405 ATGCAAATCTTTGTGAAGACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCCTCA 131464
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | ||||| ||||| ||||||||||| || || || || |||
Sbjct 131465 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGACCAA 131524
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| ||| |||||| | || || || | ||||| | ||||| | ||| || |||
Sbjct 131525 CAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACATTGTCCGACTACAAC 131584
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| ||||| || || || | || || || || ||||||||||| ||
Sbjct 131585 ATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 131631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429932117274855
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |