Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq631 116 3e-21
seq506 89.7 4e-13
>seq631
Length=151218
Score = 116 bits (128), Expect = 3e-21
Identities = 166/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767
||| |||| | |||| |||| || || || ||||||||||| |||||||||||||
Sbjct 131404 CCCACCTCTCAATCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGA 131345
Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827
|| ||| || |||| ||||| ||||| || ||| |||| | | |||||||| ||
Sbjct 131344 CAACGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGG 131285
Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887
| || |||||||| || | ||| || | | | | ||||| || ||
Sbjct 131284 AATCCCTTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAAC 131225
Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGTA 16941
||||| |||||||||||| || |||| ||||| |||||||| |||||||| ||
Sbjct 131224 TTCCAAGGTGATGGTTTTCCCAGTCAAAGTTTTAACAAAAATTTGCATTTTTTA 131171
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
|||| |||| || || || ||||||||||| ||||||||||||| || ||| || ||
Sbjct 131619 CTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAATGTTCTGCCG 131560
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
|| ||||| ||||| || ||| |||| | | |||||||| || | || ||||||
Sbjct 131559 TCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTG 131500
Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || | ||| || | | | | ||||| || || ||||| ||||||
Sbjct 131499 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAAGTGATG 131440
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||| || |||| || || ||||| || |||||
Sbjct 131439 GTTTTCCCAGTCAAAGTCTTCACAAAGATTTGCAT 131405
>seq506
Length=5049
Score = 89.7 bits (98), Expect = 4e-13
Identities = 154/222 (69%), Gaps = 4/222 (2%)
Strand=Plus/Minus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
|||| |||| || || ||||| || ||||| ||||||||||| | || ||| | |
Sbjct 1888 CTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCA 1829
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
|| ||||||||||| || ||| | || | | |||||||| || | || ||||||
Sbjct 1828 TCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTG 1769
Query 16841 TC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGA 16898
|| || || ||| || || | | | | ||||| || || ||||| ||| |
Sbjct 1768 TCTTGGATTTTGGCT--TTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAA 1711
Query 16899 TGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGT 16940
||||||| || |||| ||||| || ||||| ||||| ||||
Sbjct 1710 TGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTTGT 1669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405084341675590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |