Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq627 282 5e-71 >seq627 Length=179744 Score = 282 bits (312), Expect = 5e-71 Identities = 613/900 (68%), Gaps = 23/900 (3%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||||||||| |||||| || || |||| |||||||||||||||| || || ||| | Sbjct 173547 CATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGC 173488 Query 92850 CAAAGATATCGAATTCACTAGTG--ATTGGATTCTTGGCGTTATAATACTTTTCACCGAT 92907 || || || | || | | |||||| | |||||||| |||||| Sbjct 173487 TAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCATTACC 173428 Query 92908 CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATT 92967 || | ||||||||||||||| |||||||| | || ||| |||||| || ||| Sbjct 173427 TAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATT 173368 Query 92968 CATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAA-CGG 93026 ||| |||| | | ||||| | || || |||| | |||||| | | || || | | Sbjct 173367 CATACCTAATAAAGAAACAGGCAATGCATCT-TCAAAATATCTTTTTTCAATAGAAACAG 173309 Query 93027 CTTCTTTCAAGATTTCTATTACTCTACTATTTGG---TGGTTTTTGTACGACATAATTGT 93083 |||| | || | |||| | | | | | ||||| |||||| | | | | || | Sbjct 173308 CTTCAGT-AATAATTCTTTCAG-CGATT-TTTGGATCTGGTTTATTTTCCAAATGTTGAA 173252 Query 93084 ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGA 93143 | | || || ||||| || || |||| ||||| |||| | ||||| ||||| | Sbjct 173251 ATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAA 173192 Query 93144 ATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAG 93203 | || |||||||| | || || |||||| | |||||| |||| |||||| ||| | Sbjct 173191 AAGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGG 173132 Query 93204 aaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAAT 93263 |||| || | |||||| || || ||||||||||| | | ||| ||||| ||| | Sbjct 173131 AAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTT 173072 Query 93264 TACTGCTGA-TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCG 93322 | | ||| ||||| | | |||||| || ||||||| || || || | ||||| Sbjct 173071 CA-TCTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCA 173013 Query 93323 ATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGA 93382 ||||| || || | | | || | || | | |||| || || |||||||| || || Sbjct 173012 ATAGCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGC 172953 Query 93383 GAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCT 93442 ||||| ||||| ||||| ||| ||||| |||||||| ||||| |||||| ||||| Sbjct 172952 GAATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCT 172893 Query 93443 TCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCG 93502 || | ||||||||||| | || |||| || | ||| |||||||| || ||||| Sbjct 172892 TCTGGAATCTGCACTTCAGCACTGAAATTCTCCACCAAATTCTCATTGACAATCCCATCT 172833 Query 93503 GATGCTGCaaaaaaaGCCAATA-TATGCT-TTATAAAATGTTTC----TCA-TCATCTTT 93555 || || || ||||| || || | | | || | ||||| |||| ||| |||| | | Sbjct 172832 GAAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCAT-TCT 172774 Query 93556 AAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGA 93615 | |||| ||| ||| | |||||| |||||||||| |||||| |||||||||| || Sbjct 172773 A---TTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGA 172717 Query 93616 TGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 ||||| || |||||| | ||| || || || |||| |||||||| | ||||| Sbjct 172716 AGCTTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAA 172657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556855642076840