Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq506 120 3e-22 seq596 84.2 2e-11 >seq506 Length=5049 Score = 120 bits (132), Expect = 3e-22 Identities = 171/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 111184 AAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111243 || ||||||||||| || ||||| |||| || |||||||||||| ||||| ||| || Sbjct 1671 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCC 1730 Query 111244 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111303 || | ||| | | || ||| ||||| ||||||||||| | || || Sbjct 1731 TCTGACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTGAC 1790 Query 111304 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111363 |||||||| | || | ||| || ||||||||||||||| || |||| || | || || Sbjct 1791 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 1850 Query 111364 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAATAAATAA 111423 || || ||||||||||| || || || || || ||| | || | ||||| |||| || Sbjct 1851 AACATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGGTGGTAAAAAA 1910 Query 111424 A 111424 | Sbjct 1911 A 1911 >seq596 Length=25494 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 111280 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111339 ||||||||||| |||| || |||||||| | || | ||| || |||||||||||| Sbjct 12057 GACAAAGAAGGTATTCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAA 11998 Query 111340 GATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTG 111399 ||| || |||| || | || || || || ||||||||||| || || || || || ||| Sbjct 11997 GATGGTAGAACTTTGTCTGACTACAACATTCAAAAAGAATCCACTCTTCACTTGGTCTTG 11938 Query 111400 CGTCTGCGCGGTGG 111413 | || | ||||| Sbjct 11937 AGATTGAGAGGTGG 11924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423036179552200