Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq506 165 7e-36 seq596 150 2e-31 seq631 141 8e-29 >seq506 Length=5049 Score = 165 bits (182), Expect = 7e-36 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||||||||| ||||||||||| || |||||||| | || | ||||| ||| || Sbjct 1671 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCC 1730 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || ||| | ||| || | ||| ||||| |||||||| || ||||| ||||| || Sbjct 1731 TCTGACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTGAC 1790 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 |||||| | | || ||||| || ||||| || || ||| | || | || || ||| Sbjct 1791 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 1850 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||||||||||||||||||| | || || |||||| ||||| | || ||| Sbjct 1851 AACATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGGT 1901 >seq596 Length=25494 Score = 150 bits (166), Expect = 2e-31 Identities = 167/223 (75%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 |||||| ||||| ||||| ||||| || ||||||| ||||| ||| || |||| ||| | Sbjct 12142 TTTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCAT 12083 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 || | ||||| ||||| |||||||| || ||||||||||| || |||||| | | Sbjct 12082 CGATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 12023 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || ||||| || ||||| || || ||| | || | || || |||||||||||||| Sbjct 12022 GATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAA 11963 Query 22407 AGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449 ||||||||| | || || || ||| ||||| | || ||| || Sbjct 11962 AGAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGGTGTT 11920 >seq631 Length=151218 Score = 141 bits (156), Expect = 8e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||||||||||||||||||||| || || ||||| |||| | ||||| ||| | Sbjct 131173 AAAAATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACCTTGGAAGTTGAATC 131232 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | | || ||| | ||| | |||| || || || ||||| || || |||||||| || Sbjct 131233 CTCAGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGA 131292 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 |||||| | | || ||||| || |||||||| || || | | || | ||||| || Sbjct 131293 CCAACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCGACTA 131352 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||| ||||| || || ||| | || || |||||| ||||| | || || Sbjct 131353 CAACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 131403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419724209462665