Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq631 190 4e-43
seq506 159 6e-34
seq596 156 8e-33
>seq631
Length=151218
Score = 190 bits (210), Expect = 4e-43
Identities = 170/213 (80%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || || ||||| ||||||||||| || ||||| | ||| || || ||
Sbjct 131617 CAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAATGTTCTGCCGTC 131558
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| ||||| || || || || || | |||||||||||| |||||||| ||||| |||||
Sbjct 131557 TTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTGTC 131498
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|| ||||| | ||||||| ||||||||||||| ||||| |||||||| ||||||||
Sbjct 131497 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAAGTGATGGT 131438
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || || | ||||| || || || |||||
Sbjct 131437 TTTCCCAGTCAAAGTCTTCACAAAGATTTGCAT 131405
Score = 188 bits (208), Expect = 1e-42
Identities = 170/214 (79%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || || ||||| ||||||||||| || ||||| | || || || ||
Sbjct 131389 CAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCCGTC 131330
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| ||||| || || || || || | |||||||||||| |||||||| ||||| |||||
Sbjct 131329 TTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTGTC 131270
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|| ||||| | ||||||| ||||||||||||| ||||| |||||||||||||||||
Sbjct 131269 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAGGTGATGGT 131210
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
||| || || | || || || || || ||||||
Sbjct 131209 TTTCCCAGTCAAAGTTTTAACAAAAATTTGCATT 131176
>seq506
Length=5049
Score = 159 bits (176), Expect = 6e-34
Identities = 163/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || ||||| |||||||| ||||| || || || | || || |||||
Sbjct 1886 CAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 1827
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || || || || || || || | |||||||||||| ||||| || ||||| |||||
Sbjct 1826 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTC 1767
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| || || || || || || |||||||| | ||||| ||||||||||| |||||
Sbjct 1766 TTGGATTTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAATGGT 1707
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || || | || || ||||| || |||||
Sbjct 1706 TTTACCTGTCAAAGTTTTAACGAAAATTTGCAT 1674
>seq596
Length=25494
Score = 156 bits (172), Expect = 8e-33
Identities = 157/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || ||||| |||||||| ||||| || || || | || || |||||
Sbjct 11938 CAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 11997
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || || || || || || || | |||||||||||| |||||||| ||||| |||||
Sbjct 11998 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTC 12057
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| || || || |||||| ||||||||||| | ||||| ||||| | ||||| ||
Sbjct 12058 TTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGACTTCTAGAGTGATAGT 12117
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | ||| ||||| ||
Sbjct 12118 CTTACCAGTTAAGGTTTTGACAAA 12141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921613863472520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |