Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq631 190 4e-43 seq506 159 6e-34 seq596 156 8e-33 >seq631 Length=151218 Score = 190 bits (210), Expect = 4e-43 Identities = 170/213 (80%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || || ||||| ||||||||||| || ||||| | ||| || || || Sbjct 131617 CAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAATGTTCTGCCGTC 131558 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| ||||| || || || || || | |||||||||||| |||||||| ||||| ||||| Sbjct 131557 TTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTGTC 131498 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || ||||| | ||||||| ||||||||||||| ||||| |||||||| |||||||| Sbjct 131497 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAAGTGATGGT 131438 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || | ||||| || || || ||||| Sbjct 131437 TTTCCCAGTCAAAGTCTTCACAAAGATTTGCAT 131405 Score = 188 bits (208), Expect = 1e-42 Identities = 170/214 (79%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || || ||||| ||||||||||| || ||||| | || || || || Sbjct 131389 CAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCCGTC 131330 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| ||||| || || || || || | |||||||||||| |||||||| ||||| ||||| Sbjct 131329 TTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTGTC 131270 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || ||||| | ||||||| ||||||||||||| ||||| ||||||||||||||||| Sbjct 131269 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAGGTGATGGT 131210 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||| || || | || || || || || |||||| Sbjct 131209 TTTCCCAGTCAAAGTTTTAACAAAAATTTGCATT 131176 >seq506 Length=5049 Score = 159 bits (176), Expect = 6e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || ||||| |||||||| ||||| || || || | || || ||||| Sbjct 1886 CAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 1827 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || || || || || || || | |||||||||||| ||||| || ||||| ||||| Sbjct 1826 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTC 1767 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| || || || || || || |||||||| | ||||| ||||||||||| ||||| Sbjct 1766 TTGGATTTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAATGGT 1707 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || | || || ||||| || ||||| Sbjct 1706 TTTACCTGTCAAAGTTTTAACGAAAATTTGCAT 1674 >seq596 Length=25494 Score = 156 bits (172), Expect = 8e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || ||||| |||||||| ||||| || || || | || || ||||| Sbjct 11938 CAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 11997 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || || || || || || || | |||||||||||| |||||||| ||||| ||||| Sbjct 11998 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTC 12057 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| || || || |||||| ||||||||||| | ||||| ||||| | ||||| || Sbjct 12058 TTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGACTTCTAGAGTGATAGT 12117 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | ||| ||||| || Sbjct 12118 CTTACCAGTTAAGGTTTTGACAAA 12141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921613863472520