Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq596 125 6e-24
seq506 120 3e-22
seq631 107 2e-18
>seq596
Length=25494
Score = 125 bits (138), Expect = 6e-24
Identities = 154/208 (74%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || || || ||||| ||||| || || || || | ||| || |
Sbjct 11936 CTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCA 11995
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| ||||||||||| || || | ||||||| ||| ||||| || ||||| ||||||||
Sbjct 11996 TCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTG 12055
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||| ||||| ||||| || | || | ||||||||| || |||||||| ||||| |
Sbjct 12056 TCTTGGATTTTGGCTTTGA-CGTTATCGATGGTGTCGGAGGATTCGACTTCTAGAGTGAT 12114
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAA 45332
|| || || |||| ||||| ||||||
Sbjct 12115 AGTCTTACCAGTTAAGGTTTTGACAAAA 12142
>seq506
Length=5049
Score = 120 bits (132), Expect = 3e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || || || ||||| ||||| || || || || | ||| || |
Sbjct 1888 CTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCA 1829
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| ||||||||||| || || | ||||||| ||| ||||| || || || ||||||||
Sbjct 1828 TCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTG 1769
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| ||||| ||| | || | |||||| || || |||||||| | ||||
Sbjct 1768 TCTTGGATTTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAATG 1709
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
||||| || || | |||||| || ||||||||||||
Sbjct 1708 GTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATC 1673
>seq631
Length=151218
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || || || || ||||||||||| || || ||| | ||| |
Sbjct 131391 CTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCCG 131332
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| ||||| ||||| || || | ||||||| ||| ||||| || ||||| ||||||||
Sbjct 131331 TCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTG 131272
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|| || || || |||| || | || | |||||| || || || ||||| | || |
Sbjct 131271 TCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAGGTGAT 131213
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || || | |||||| ||||||||||||||
Sbjct 131212 GGTTTTCCCAGTCAAAGTTTTAACAAAAATTTGCAT 131177
Score = 105 bits (116), Expect = 6e-18
Identities = 155/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || || || || ||||||||||| || || ||| | ||| |
Sbjct 131619 CTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAATGTTCTGCCG 131560
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| ||||| ||||| || || | ||||||| ||| ||||| || ||||| ||||||||
Sbjct 131559 TCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTG 131500
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|| || || || |||| || | || | |||||| || || || ||||| | ||| |
Sbjct 131499 TCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAAGTGAT 131441
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
||||| || || | ||| || ||||| |||||||||
Sbjct 131440 GGTTTTCCCAGTCAAAGTCTTCACAAAGATTTGCATC 131404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451999013320360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |