Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq596 125 6e-24 seq506 120 3e-22 seq631 107 2e-18 >seq596 Length=25494 Score = 125 bits (138), Expect = 6e-24 Identities = 154/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || || || ||||| ||||| || || || || | ||| || | Sbjct 11936 CTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCA 11995 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||||||||| || || | ||||||| ||| ||||| || ||||| |||||||| Sbjct 11996 TCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTG 12055 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| ||||| ||||| || | || | ||||||||| || |||||||| ||||| | Sbjct 12056 TCTTGGATTTTGGCTTTGA-CGTTATCGATGGTGTCGGAGGATTCGACTTCTAGAGTGAT 12114 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAA 45332 || || || |||| ||||| |||||| Sbjct 12115 AGTCTTACCAGTTAAGGTTTTGACAAAA 12142 >seq506 Length=5049 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || || || ||||| ||||| || || || || | ||| || | Sbjct 1888 CTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCA 1829 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||||||||| || || | ||||||| ||| ||||| || || || |||||||| Sbjct 1828 TCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTG 1769 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| ||||| ||| | || | |||||| || || |||||||| | |||| Sbjct 1768 TCTTGGATTTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAATG 1709 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||| || || | |||||| || |||||||||||| Sbjct 1708 GTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATC 1673 >seq631 Length=151218 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || || || || ||||||||||| || || ||| | ||| | Sbjct 131391 CTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCCG 131332 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||| ||||| || || | ||||||| ||| ||||| || ||||| |||||||| Sbjct 131331 TCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTG 131272 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 || || || || |||| || | || | |||||| || || || ||||| | || | Sbjct 131271 TCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAGGTGAT 131213 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || | |||||| |||||||||||||| Sbjct 131212 GGTTTTCCCAGTCAAAGTTTTAACAAAAATTTGCAT 131177 Score = 105 bits (116), Expect = 6e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || || || || ||||||||||| || || ||| | ||| | Sbjct 131619 CTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAATGTTCTGCCG 131560 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||| ||||| || || | ||||||| ||| ||||| || ||||| |||||||| Sbjct 131559 TCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTG 131500 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 || || || || |||| || | || | |||||| || || || ||||| | ||| | Sbjct 131499 TCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAAGTGAT 131441 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||| || || | ||| || ||||| ||||||||| Sbjct 131440 GGTTTTCCCAGTCAAAGTCTTCACAAAGATTTGCATC 131404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451999013320360