Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq631 141 2e-28
seq596 113 1e-19
seq506 100 7e-16
>seq631
Length=151218
Score = 141 bits (156), Expect = 2e-28
Identities = 165/222 (74%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | |||||| |||||||||||||||| ||||||||| | ||| || || ||
Sbjct 131392 TCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCC 131333
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||| ||| || || || || || | | || ||||| || ||| ||||||
Sbjct 131332 GTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTT 131273
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| ||||| ||| ||| |||| |||||||| | ||| || ||||| |||||
Sbjct 131272 GTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAGGTGAT 131213
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
|| || || || | |||||| ||||||||||| ||||||
Sbjct 131212 GGTTTTCCCAGTCAAAGTTTTAACAAAAATTTG---CATTTT 131174
Score = 136 bits (150), Expect = 9e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | |||||| |||||||||||||||| ||||||||| | ||| || || ||
Sbjct 131620 TCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAATGTTCTGCC 131561
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||| ||| || || || || || | | || ||||| || ||| ||||||
Sbjct 131560 GTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTT 131501
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| ||||| ||| ||| |||| |||||||| | ||| || ||||| |||||
Sbjct 131500 GTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAAGTGAT 131441
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || | ||| |||||||| |||||
Sbjct 131440 GGTTTTCCCAGTCAAAGTCTTCACAAAGATTTG 131408
>seq596
Length=25494
Score = 113 bits (124), Expect = 1e-19
Identities = 152/209 (73%), Gaps = 2/209 (1%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| ||||| || || ||||| | ||||||||||| |||||| || ||
Sbjct 11935 TCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 11994
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||||| || || || || ||||| | | || ||||| || ||| ||||||
Sbjct 11995 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 12054
Query 199534 CTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGA 199592
|| || || ||| || || ||| |||| |||||| | | ||| || || | ||||
Sbjct 12055 GTCTTGGAT-TTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGACTTCTAGAGTGA 12113
Query 199593 TCGTCTTACCCGTGAGAGTTTTCACAAAA 199621
| |||||||| || | ||||| ||||||
Sbjct 12114 TAGTCTTACCAGTTAAGGTTTTGACAAAA 12142
>seq506
Length=5049
Score = 100 bits (110), Expect = 7e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | ||| || || || || ||||| | ||||||||||| |||||| || ||
Sbjct 1889 TCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 1830
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||||| || || || || ||||| | | || ||||| || || ||||||
Sbjct 1829 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTT 1770
Query 199534 CTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGA 199592
|| || || ||| || || || || | |||||| | | ||| || ||||| || |
Sbjct 1769 GTCTTGGAT-TTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAA 1711
Query 199593 TCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
| || ||||| || | |||||| || ||||||||
Sbjct 1710 TGGTTTTACCTGTCAAAGTTTTAACGAAAATTTG 1677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178910407244647
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |