Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq631 120 3e-22 seq506 100 3e-16 seq596 82.4 8e-11 >seq631 Length=151218 Score = 120 bits (132), Expect = 3e-22 Identities = 168/233 (72%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 38239 AAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGG 38298 ||||||||||||| || || ||||| | || || |||||||||||| | || || || Sbjct 131172 AAAAAATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACCTTGGAAGTTGAAT 131231 Query 38299 CCACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC 38357 || | |||| | | | |||| | || || |||| |||||||| || ||||| | Sbjct 131232 CCTCAGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCT 131290 Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417 |||||||| | | |||| || || |||||| |||| |||| | || | |||| Sbjct 131291 GACCAACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCGAC 131350 Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||||||| |||| || || ||||| || | |||||||| || Sbjct 131351 TACAACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 131403 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || | || || ||||||||||| | || || || || | Sbjct 131405 ATGCAAATCTTTGTGAAGACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCCTCA 131464 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || |||| |||||||| || ||||| | ||||| Sbjct 131465 GACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGACCA 131523 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | | |||| || || |||||| |||| |||| | || | ||||||||| Sbjct 131524 ACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACATTGTCCGACTACAA 131583 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||| |||| || || ||||| || | |||||||| || Sbjct 131584 CATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 131631 >seq506 Length=5049 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || |||||||| ||||| ||||| | || || |||||||| ||| | || ||||| || Sbjct 1671 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCC 1730 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | |||||| ||||||| |||||||| || || || | ||| Sbjct 1731 TCTGACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTGAC 1790 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 ||||| | | || | || || ||||| |||| || | | || | |||||| Sbjct 1791 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 1850 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| ||| | || || || ||||| || | |||||||| || Sbjct 1851 AACATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGG 1900 >seq596 Length=25494 Score = 82.4 bits (90), Expect = 8e-11 Identities = 151/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 || || ||||| | || || || || ||||| | || ||||| || |||||| | | Sbjct 12141 TTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCATC 12082 Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | |||| | |||| ||||||| |||||||| || ||||| | |||||||| | | Sbjct 12081 GATAACG-TCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 12023 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 || | || || ||||| |||| || | | || | ||||||||||| ||||| Sbjct 12022 GATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAA 11963 Query 38432 GGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| | || || || ||||| || | |||||||| || Sbjct 11962 AGAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 11924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500168167149440