Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq506 185 2e-41
seq596 168 1e-36
seq631 161 2e-34
>seq506
Length=5049
Score = 185 bits (204), Expect = 2e-41
Identities = 174/222 (78%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||||||| | |||||| ||||| ||||||||||| ||||| || | | |||
Sbjct 1895 TCTCAATCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGT 1836
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| | || ||||| || ||||| | || ||||||||| || || || ||
Sbjct 1835 TCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACC 1776
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|||||||||||| ||||| || || || ||||||||||| || ||| ||||| |
Sbjct 1775 TTCTTTGTCTTGGATTTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAA 1716
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| || || |||||||||||||| ||||| | ||||||
Sbjct 1715 GGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCAT 1674
>seq596
Length=25494
Score = 168 bits (186), Expect = 1e-36
Identities = 165/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | |||||||||||| ||||||||||| ||||| || | | |||
Sbjct 11929 TCTCAATCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGT 11988
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| | || ||||| || ||||| | || ||||||||| || ||||| ||
Sbjct 11989 TCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACC 12048
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|||||||||||| ||||| |||||||| || |||||||| || ||| ||||| ||
Sbjct 12049 TTCTTTGTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGACTTCTAG 12108
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| | ||||| || || || ||||| || ||
Sbjct 12109 AGTGATAGTCTTACCAGTTAAGGTTTTGACAAA 12141
>seq631
Length=151218
Score = 161 bits (178), Expect = 2e-34
Identities = 170/224 (76%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||||||| | ||| || || ||||| ||||| || ||||| |||| | ||
Sbjct 131398 TCTCAATCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGT 131339
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | ||| ||||| || || || | || ||||||||| || ||||| ||
Sbjct 131338 TCTGCCGTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCC 131279
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||||||||| || || || ||||||||| || |||||||| || ||| ||||| |
Sbjct 131278 TTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAA 131219
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
||| | || || || ||||||||||| || || | ||||||||
Sbjct 131218 GGTGATGGTTTTCCCAGTCAAAGTTTTAACAAAAATTTGCATTT 131175
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||||||| | ||| || || ||||| ||||| || ||||| |||| | ||
Sbjct 131626 TCTCAATCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAATGT 131567
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | ||| ||||| || || || | || ||||||||| || ||||| ||
Sbjct 131566 TCTGCCGTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCC 131507
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||||||||| || || || ||||||||| || |||||||| || ||| ||||| |
Sbjct 131506 TTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAA 131447
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | || || || |||||||| || || || | ||||||
Sbjct 131446 AGTGATGGTTTTCCCAGTCAAAGTCTTCACAAAGATTTGCAT 131405
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109471066512347
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |