Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq627 289 3e-73 >seq627 Length=179744 Score = 289 bits (320), Expect = 3e-73 Identities = 643/956 (67%), Gaps = 24/956 (3%) Strand=Plus/Minus Query 36828 TAAAAATCTTCATCTAACGTAAA------TTTTA---TTTCCTTATTACT--ATT----C 36872 |||||||||||||| || ||||| || | |||| ||||||| ||| | Sbjct 173606 TAAAAATCTTCATCAAAGGTAAAAGCACCTTCTGCACTTTCTGTATTACTTGATTTTGCC 173547 Query 36873 ATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCT 36932 ||||| || ||||||||| || ||||| | |||| || ||||| || || ||| || Sbjct 173546 ATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGCT 173487 Query 36933 AGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGA- 36991 | ||| |||||||||||||||||||||||||| || |||||| ||| | | ||| | Sbjct 173486 AATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATA-ATATTTTT-CATTAC 173429 Query 36992 -TAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGT 37050 |||| | || | ||||| ||||||||||| | |||| | ||| | | || | Sbjct 173428 CTAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCAT 173369 Query 37051 TTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAG 37110 | ||||| | || || || | |||||||| || | || |||||| || |||| Sbjct 173368 TCATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACAG 173309 Query 37111 CATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACA 37170 | || ||| || | || | || | | ||| || || |||| || ||| | Sbjct 173308 CTTCAGTAATAATTCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAATA 173249 Query 37171 ATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGG 37230 ||| ||||||||||||| |||| ||||||||||||| ||||||||||| ||||| | Sbjct 173248 ATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAAG 173189 Query 37231 TTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAA 37290 | || |||||||| || || |||| || | |||||| ||||| ||||| || || |||| Sbjct 173188 TCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAAA 173129 Query 37291 AGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAAT 37350 |||||| ||||||||| || |||||||| || | | | | | || || | | || Sbjct 173128 AGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCAT 173069 Query 37351 CAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTG 37410 | ||||||| | | | ||| || || ||| ||| | | ||| |||||||| | Sbjct 173068 CTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATAG 173009 Query 37411 CTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTAT 37470 | || || | || | |||||| |||| | ||||||||||| || | | || Sbjct 173008 CATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGCGAAT 172949 Query 37471 ACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAG 37530 | ||||| || |||||||| || || || || || |||||||| ||||||| | Sbjct 172948 ATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTCTG 172889 Query 37531 ATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAG 37590 | || || || | || ||| | || || ||||| || |||||||| || Sbjct 172888 GAATCTGCACTTCAGCACTGAAATTCTCCACCAAATTCTCATTGACAATCCCATCTGAAG 172829 Query 37591 CTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCATTTGATAATTTTT 37647 | || || || || | ||| | || ||| ||||||| ||||| | || | Sbjct 172828 CAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTATTAT 172769 Query 37648 TCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATG 37707 |||| || | |||||||| || | ||| | ||| || | |||||||| || | Sbjct 172768 TCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGCTTCAG 172709 Query 37708 CACGTTTATACATCGT-CCAAATATCATTATGTTGTATTGGAAATATTACAAATCT 37762 ||||||| || | | | ||| || |||| | || |||||||| | |||||||| Sbjct 172708 CACGTTTGTA-AGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATCT 172654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592311313665640