Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq627 289 3e-73
>seq627
Length=179744
Score = 289 bits (320), Expect = 3e-73
Identities = 643/956 (67%), Gaps = 24/956 (3%)
Strand=Plus/Minus
Query 36828 TAAAAATCTTCATCTAACGTAAA------TTTTA---TTTCCTTATTACT--ATT----C 36872
|||||||||||||| || ||||| || | |||| ||||||| ||| |
Sbjct 173606 TAAAAATCTTCATCAAAGGTAAAAGCACCTTCTGCACTTTCTGTATTACTTGATTTTGCC 173547
Query 36873 ATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCT 36932
||||| || ||||||||| || ||||| | |||| || ||||| || || ||| ||
Sbjct 173546 ATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGCT 173487
Query 36933 AGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGA- 36991
| ||| |||||||||||||||||||||||||| || |||||| ||| | | ||| |
Sbjct 173486 AATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATA-ATATTTTT-CATTAC 173429
Query 36992 -TAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGT 37050
|||| | || | ||||| ||||||||||| | |||| | ||| | | || |
Sbjct 173428 CTAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCAT 173369
Query 37051 TTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAG 37110
| ||||| | || || || | |||||||| || | || |||||| || ||||
Sbjct 173368 TCATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACAG 173309
Query 37111 CATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACA 37170
| || ||| || | || | || | | ||| || || |||| || ||| |
Sbjct 173308 CTTCAGTAATAATTCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAATA 173249
Query 37171 ATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGG 37230
||| ||||||||||||| |||| ||||||||||||| ||||||||||| ||||| |
Sbjct 173248 ATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAAG 173189
Query 37231 TTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAA 37290
| || |||||||| || || |||| || | |||||| ||||| ||||| || || ||||
Sbjct 173188 TCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAAA 173129
Query 37291 AGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAAT 37350
|||||| ||||||||| || |||||||| || | | | | | || || | | ||
Sbjct 173128 AGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCAT 173069
Query 37351 CAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTG 37410
| ||||||| | | | ||| || || ||| ||| | | ||| |||||||| |
Sbjct 173068 CTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATAG 173009
Query 37411 CTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTAT 37470
| || || | || | |||||| |||| | ||||||||||| || | | ||
Sbjct 173008 CATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGCGAAT 172949
Query 37471 ACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAG 37530
| ||||| || |||||||| || || || || || |||||||| ||||||| |
Sbjct 172948 ATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTCTG 172889
Query 37531 ATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAG 37590
| || || || | || ||| | || || ||||| || |||||||| ||
Sbjct 172888 GAATCTGCACTTCAGCACTGAAATTCTCCACCAAATTCTCATTGACAATCCCATCTGAAG 172829
Query 37591 CTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCATTTGATAATTTTT 37647
| || || || || | ||| | || ||| ||||||| ||||| | || |
Sbjct 172828 CAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTATTAT 172769
Query 37648 TCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATG 37707
|||| || | |||||||| || | ||| | ||| || | |||||||| || |
Sbjct 172768 TCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGCTTCAG 172709
Query 37708 CACGTTTATACATCGT-CCAAATATCATTATGTTGTATTGGAAATATTACAAATCT 37762
||||||| || | | | ||| || |||| | || |||||||| | ||||||||
Sbjct 172708 CACGTTTGTA-AGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATCT 172654
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592311313665640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |