Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq664 277 9e-70
>seq664
Length=41649
Score = 277 bits (306), Expect = 9e-70
Identities = 488/704 (69%), Gaps = 19/704 (3%)
Strand=Plus/Minus
Query 25890 TTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAA 25949
||||| | || || |||||| | ||||| | |||||| | |||||||||||||||||
Sbjct 33708 TTGGAGAAAACAATGTCCAATCTGAATTTTCTTTAACTTTTTGCATAAATAAATCTGGAA 33649
Query 25950 TCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTA 26009
||| | |||| ||| |||||||| ||||| ||||||||||| || ||||| || |
Sbjct 33648 CCCATAATGCAGGAAACAAATCTCTTGCTCTAATTTCTTCTTTACCATGATTTTTCCGAA 33589
Query 26010 GATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTT 26069
||| | |||||||||||||| ||||||||||||||||| | ||||||| |||
Sbjct 33588 TATCAATAAAATCAAAAATATCACTATGCCATGGTTCTAAATAAAGAGCAAAAGCACCAG 33529
Query 26070 TTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129
|||||| ||||||||||| || ||||||||||| | |||||||||| | | |||||
Sbjct 33528 GTCTTTTATTACCACCTTGATCAACATATCTTGCAGTATTATTGAAAACTCTAATCATTG 33469
Query 26130 GAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATAT 26189
||| |||||| | ||| || || || | ||| | || || || ||||||||||
Sbjct 33468 GAATCAATCCATTAGAAGTCCCATTAGTACCTGCAATATAAGAACCGGTTGATCTAATAT 33409
Query 26190 CGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTG 26249
||| ||||| ||| || |||||||| ||| ||||| ||||| ||| | |
Sbjct 33408 TATGAATATGAAGACCAATACCACCAGCAGTTTTAGAAATCAAAGCACATTCTTTTAAAG 33349
Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309
|||| |||| || | ||| ||| ||||||| | | | ||||| ||||| | ||
Sbjct 33348 TATCATAAATACCATCAATGGAATCGTCTTTCATAGCAACAAGGAAACATGAAGACATTT 33289
Query 26310 GCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTCA- 26368
| | | |||||| | ||| ||||| || || | ||||| || |||||| |||
Sbjct 33288 GAGGTCTTGGTGTTCCAGCATTGAATAAAGTTGGAGATGCATGTGTGAAATATC--TCAA 33231
Query 26369 ----CTCAAAGCTGTATAAGTTTCAAGAACTTCATCGATATTGTAATTACTAACTTCAAT 26424
||||| |||||||||| | |||| || |||| || | || | |
Sbjct 33230 AGACATCAAA---TTATAAGTTTCCAAGACTTTTTCAATATCTGAACCATGAATCCCGAC 33174
Query 26425 AGCTGTTCTTAACCACATATATTGAGGTCGTTCAATTACATTATTTTCC---GCATCTCT 26481
||| ||| | || || |||||||| |||| || | || ||| | ||| |
Sbjct 33173 AGCAACTCTCATGATCAAATGTTGAGGTCTTTCA---GCAAT-TTGTCCATTGATTCT-T 33119
Query 26482 AATCAAATAAGATTTTTCTAAAGTTTTCAATCCAAAATAATCATGATTGAAATCTCTTTT 26541
||| ||||| ||| |||| || ||||| || |||||||||| || | ||||||||| |
Sbjct 33118 AAT-AAATACGATCTTTCCAATGTTTTGAAACCAAAATAATTATATTGGAAATCTCTATC 33060
Query 26542 TTGTACTATAATTGAATCAAGAAATTCTCTATATTTTTCTACAA 26585
| || ||| || | || ||| ||| |||||||||||
Sbjct 33059 ATAAACAATAGCACTATTTAAAACATCTTTATTTTTTTCTACAA 33016
Score = 102 bits (112), Expect = 4e-17
Identities = 125/171 (73%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 24985 ATCTCTAATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGA 25044
|||||| | ||||| | ||| | || ||||| |||||||| |||||| |
Sbjct 34595 ATCTCTTAGCAAGTATGGATTGACAATTTGGAATTCACCAGACAACGTTCTTCTAGAGTA 34536
Query 25045 TAAGTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGC 25104
| |||||||||||||||||| |||||||| || | || |||||||| || || |||||
Sbjct 34535 CATGTTTGAAGTGAATGGTTCGAAACATTCGTTGTAACCCAAGATTTGCGATGTTGATGC 34476
Query 25105 TGTTGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAAT 25155
|||||||||| || | ||| | || |||||||| ||| || |||||
Sbjct 34475 TGTTGGCATTGGAGCCAATAACAATGAGTTTCTCAATCCAGTTTCCACAAT 34425
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253037714811575
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |