Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq664 226 3e-54
>seq664
Length=41649
Score = 226 bits (250), Expect = 3e-54
Identities = 512/764 (67%), Gaps = 18/764 (2%)
Strand=Plus/Plus
Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937
||| | ||||| | || |||| || || || || ||||||| ||| ||||||| |||
Sbjct 33816 TGGTATGCTATCTTGGAAGCACAAACTGAAACAGGTACACCATTTATTGTTTACAAAGAT 33875
Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997
||||||||||| || ||| ||||| ||||| ||||| ||||| || ||| | ||
Sbjct 33876 GCTTGTAACAAAAAATCTAATCAAAAAAATTTAGGAACTATCAAATCATCTAATTTGTGT 33935
Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057
|||||| | || || ||||||| || || || |||||||| |||||||| || ||
Sbjct 33936 TGTGAAATTGTGGAATATTCAGATAACGACGAAACTGCTGTTTGTAATTTGGCTTCTATT 33995
Query 76058 GCCCTTCCAAAGTATGTCAATG------AAGAGACTCGC------ACTTTTGATTATGAA 76105
|| | || | |||||| |||| || |||| ||||| ||
Sbjct 33996 GCTTTGCCCGCTTTCATCAATGTTTCAGAAGATGGTCAACAACAAACTTATGATTTCCAA 34055
Query 76106 AAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAAT 76165
||| | || || | |||| | |||| | |||| | ||| |||||||||||||||||
Sbjct 34056 AAATTACACGATGTTGCAAAAGTCATTACAAGAAATTTGAACAGAGTCATTGACAGAAAT 34115
Query 76166 TTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGT 76225
| ||| || || || ||||| |||| || |||||| ||||||||||||||| | |||
Sbjct 34116 TATTACCCTGTGGAAACTGCAAGAAACTCAAATATGAGACACAGACCTATTGCCCTTGGT 34175
Query 76226 GTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCTACGCATTTGATTCAGATGAAGC 76284
||||||||| | || ||| ||||| || || | | |||||||||| || ||||
Sbjct 34176 GTTCAAGGTTTGGCTGATACTTTTATGCTTTTGAGAATTC-CATTTGATTCCGAACAAGC 34234
Query 76285 CAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTG 76344
||| | ||||| || || || ||||| |||| || || | |||| |
Sbjct 34235 CAAACAACTGAATATTCAAATTTTCGAAACATTGTACCATGCTGCATTGGAATCTTCAAA 34294
Query 76345 TGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGG 76404
||| |||| | | ||||| | || | | || | ||||| || || || |||||
Sbjct 34295 CGAAATGGCCGTGGAAGAAGGTCCATACCAATCTTTCCAAGGTTCACCAGCTTCACAAGG 34354
Query 76405 GGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCA--ACTACGACTGGGATGTT 76462
|| | || ||||| |||||||| | | |||| || | | || ||||| |
Sbjct 34355 TGTTTTGCAATTTGACATGTGGGATAGAG-CTCCAA-CTGATTTGTGGGAATGGGAATCT 34412
Query 76463 CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCA 76522
| | ||| || ||| | || | | ||| | || |||| |||||||||
Sbjct 34413 TTGAGAGAAAAAATTGTGGAAACTGGATTGAGAAACTCATTGTTATTGGCTCCAATGCCA 34472
Query 76523 ACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAAC 76582
||||| || || | |||||||||||| | || ||||| || ||||||| ||| |||||
Sbjct 34473 ACAGCATCAACATCGCAAATCTTGGGTTACAACGAATGTTTCGAACCATTCACTTCAAAC 34532
Query 76583 ATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAA 76626
|| ||| |||||||| | | ||||| || ||||||||
Sbjct 34533 ATGTACTCTAGAAGAACGTTGTCTGGTGAATTCCAAATTGTCAA 34576
Score = 84.2 bits (92), Expect = 3e-11
Identities = 235/358 (66%), Gaps = 2/358 (1%)
Strand=Plus/Plus
Query 75222 TGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACAT 75281
|| ||||| | || || |||| || || || ||| ||||| |||||||| || |
Sbjct 33157 TGATCATGAGAGTTGCTGTCGGGATTCATGGTTCAGATATTGAAAAAGTCTTGGAAACTT 33216
Query 75282 ACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGT 75340
| | |||||| || ||| |||| || ||| | ||||| | |||||||||||
Sbjct 33217 ATAATTTGATGTCTTTGAGATAT-TTCACACATGCATCTCCAACTTTATTCAATGCTGGA 33275
Query 75341 ACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAAC 75400
||||||||||| || ||||| || |||||| | || | || || || || || |
Sbjct 33276 ACACCAAGACCTCAAATGTCTTCATGTTTCCTTGTTGCTATGAAAGACGATTCCATTGAT 33335
Query 75401 GGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGG 75460
||||| |||| ||| | | || ||||| || || || ||||| ||||||||
Sbjct 33336 GGTATTTATGATACTTTAAAAGAATGTGCTTTGATTTCTAAAACTGCTGGTGGTATTGGT 33395
Query 75461 ATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCA 75520
| || || ||| || | ||| | | ||| |||| || || ||||| ||
Sbjct 33396 CTTCATATTCATAATATTAGATCAACCGGTTCTTATATTGCAGGTACTAATGGGACTTCT 33455
Query 75521 GATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAG 75578
|||| | ||||||||| || | || || || || || | ||||| ||||||
Sbjct 33456 AATGGATTGATTCCAATGATTAGAGTTTTCAATAATACTGCAAGATATGTTGATCAAG 33513
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596564074274080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |