Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq627 297 3e-75
seq506 150 3e-31
seq631 138 2e-27
seq596 129 9e-25
>seq627
Length=179744
Score = 297 bits (328), Expect = 3e-75
Identities = 581/847 (69%), Gaps = 16/847 (2%)
Strand=Plus/Minus
Query 17861 GCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATT 17920
||||||| || || ||| |||| || |||||||| || || ||| | ||||| ||
Sbjct 173537 GCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGCTAATGAAATA 173478
Query 17921 AAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATTAATTCGTAT 17980
| |||||||||||||||||| | |||||||||||||| | |||| |
Sbjct 173477 TTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCATTACCTAATGCAACC 173418
Query 17981 AATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTAGT 18040
||||||||||| || |||||||| |||||||| |||||| | ||||||||||| |
Sbjct 173417 AATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATTCATACCTAAT 173358
Query 18041 AGTCTGAAAGGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTTATT 18100
| | ||| | ||||| || | || ||| || || ||||| || | ||
Sbjct 173357 AAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACAGCTTCAGTAATA 173298
Query 18101 ATGTTTATTACCCTAGATTTTGGCAATTTATTAATTATGTGATTATA-ATATAATAAACA 18159
|| || | | | |||||| | | | || ||| | | | | | |||||| |||
Sbjct 173297 ATTCTT-TCAGC---GATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAATAATAGACA 173242
Query 18160 CGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAACCC 18219
|||||||||||||||| ||||||||||| | || ||||| || ||| || || ||
Sbjct 173241 TGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTCAAACC 173182
Query 18220 GGGCATTATACCTCttttt-tttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAATA 18278
||||| | ||| |||||| |||| |||||| || | || || || |||||||| |
Sbjct 173181 TGGCATCA-ACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAAAAGAAAA 173123
Query 18279 TACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAA-ACTGTATTTATTGCTCAG 18336
||| ||||| ||| || || || | |||||||||||||| | || || | || |
Sbjct 173122 CACCTTCAACAGCA-GCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCATCT-TG 173065
Query 18337 TATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATT 18396
|||||| | |||||||| ||| || || ||| | || ||||||||
Sbjct 173064 AATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATAGCATT 173005
Query 18397 AAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACAT 18456
||||| || ||||||| | |||||| |||||||| ||||| || | ||||| |
Sbjct 173004 GAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGCGAATATGT 172945
Query 18457 TTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATA 18516
|||| ||| || ||||||| || || || | ||||| || |||| || |||
Sbjct 172944 TTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTCTGGAAT 172885
Query 18517 TTGAATCTC-GCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATG 18575
|| | || || | |||| | || |||||||||||||| || || || || | || |
Sbjct 172884 CTGCACTTCAGCACTGAAAT-TCTCCACCAAATTCTCATTGACAATCCCATCTGAAGCAG 172826
Query 18576 CGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA---GATTGTTCC 18632
|||||||||| ||||| |||||||| | ||||||| || || | ||| ||||
Sbjct 172825 CGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTATTATTCC 172766
Query 18633 ATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCCT 18692
| || | |||||||| || ||||| | |||||| | |||||||| || | ||| ||
Sbjct 172765 AGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGCTTCAGCAC 172706
Query 18693 GTTTGTA 18699
|||||||
Sbjct 172705 GTTTGTA 172699
>seq506
Length=5049
Score = 150 bits (166), Expect = 3e-31
Identities = 177/238 (74%), Gaps = 1/238 (0%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| |||||||| || ||||||| ||||| || ||||| ||||| || |||||||||
Sbjct 1671 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCC 1730
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
||||| | ||| || || ||| ||||| ||||| |||||||| || || || ||
Sbjct 1731 TCTGACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTGAC 1790
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||| | ||| ||||| || | |||||| |||||||| || || ||
Sbjct 1791 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 1850
Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT-GTAAAA 156056
|| || ||||| | || ||||| || || || ||||| ||||| ||| ||||||
Sbjct 1851 AACATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGGTGGTAAAA 1908
>seq631
Length=151218
Score = 138 bits (152), Expect = 2e-27
Identities = 171/232 (74%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
||||||||||| ||| ||||||| |||||||| ||||| || || || ||||| |||
Sbjct 131174 AAAATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACCTTGGAAGTTGAATCC 131233
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|| || | || ||||| || || || || || |||||||| || || || ||
Sbjct 131234 TCAGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGAC 131293
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||||| ||| ||||| ||| | ||||| |||||| || || || ||
Sbjct 131294 CAACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCGACTAC 131353
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049
| | ||||||| ||| |||| || || || || || ||||| ||||| ||
Sbjct 131354 A--ACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 131403
Score = 127 bits (140), Expect = 3e-24
Identities = 168/231 (73%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || |||||||| ||||| || || || ||||| ||| ||
Sbjct 131405 ATGCAAATCTTTGTGAAGACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCCTCA 131464
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||||| || || || || || |||||||| || || || || |||
Sbjct 131465 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGACCAA 131524
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| ||| ||||| ||| | ||||| |||||| || || || || |
Sbjct 131525 CAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACATTGTCCGACTACA-- 131582
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| ||||||| ||| |||| || || || || || ||||| ||||| ||||
Sbjct 131583 ACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGGTG 131633
>seq596
Length=25494
Score = 129 bits (142), Expect = 9e-25
Identities = 161/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891
||| | ||||| || ||||| || ||||| || ||||||||||| || || | ||
Sbjct 12141 TTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCATC 12082
Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951
||||| ||| ||||| ||||| |||||||| || || || || ||||||||||||
Sbjct 12081 GATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 12022
Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011
|| | ||| ||||| || | |||||| |||||||| || || || || || |||
Sbjct 12021 ATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 11962
Query 156012 GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTGT 156052
|| | || ||||| || || || ||||| ||||| |||||
Sbjct 11961 GAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGGTGT 11921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731865221035600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |