Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq664 284 4e-71 seq571 111 5e-19 seq592 102 2e-16 seq710 96.9 1e-14 >seq664 Length=41649 Score = 284 bits (314), Expect = 4e-71 Identities = 659/988 (67%), Gaps = 19/988 (2%) Strand=Plus/Minus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646 ||||||| |||| |||||| || ||||| || | || || ||||| ||||| |||| Sbjct 33996 CAATAGAAGCCAAATTACAAACAGCAGTTTCGTCGTTATCTGAATATTCCACAATTTCAC 33937 Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706 | |||| ||||| ||||| || |||||||| || || |||||||| ||||||||| Sbjct 33936 AACACAAATTAGATGATTTGATAGTTCCTAAATTTTTTTGATTAGATTTTTTGTTACAAG 33877 Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCC 155766 |||| ||||| | ||| |||| || ||||| || | ||||| |||| || || Sbjct 33876 CATCTTTGTAAACAATAAATGGTGTACCTGTTTCAGTTTGTGCTTCCAAGATAGCATACC 33817 Query 155767 AGAGGTCACGGGCATTAATTTGCTTGTTGTA--TCTGCCTTCCGACTCATATTTCATATA 155824 | | | | || ||||| || || || ||| ||||| || ||||| | | || Sbjct 33816 ATAATTTTTGTGCTTTAATAG--TTTTTCTACCTCTTCCTTCTGAAACATATCTATTGTA 33759 Query 155825 CAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG----CACTTATCGGGGC 155880 || || |||| |||| ||| |||||| | || || ||||| || Sbjct 33758 CAATTTTTCAAAATCTGCACCATAAACATCACTTAAACCTGGAGCTTCACTT----GGAG 33703 Query 155881 AAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAA 155940 |||||| | |||| | ||| | | || | |||||||| ||| |||| | Sbjct 33702 AAAACAATGTCCAATCTGAATTTTCTTTAACTTTTTGCATAAATAAATCTGGAACCCATA 33643 Query 155941 TAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTA 156000 ||| || | || ||||| | || || | || ||||| ||||| | || | Sbjct 33642 ATGCAGGAAACAAATCTCTTGCTCTAATTTCTTCTTTACCATGATTTTTCCGAATATCAA 33583 Query 156001 AGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCT 156060 || || ||||||| ||| ||| || | ||| | ||||||| |||| || | Sbjct 33582 TAAAATCAAAAATATCACTATGCCATGGTTCTAAATAAAGAGCAAAAGCACCAGGTCTTT 33523 Query 156061 TG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAA 156117 | ||||| ||||| ||||| | ||||| |||||||| || | | ||| ||||| | Sbjct 33522 TATTACCACCTTGATCAACATATCTTGCAGTATTATTGAAAACTCTAATCATTGGAATCA 33463 Query 156118 TACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAA 156177 ||||| ||||| ||||| || || ||||| ||||| | ||| | || |||||||| Sbjct 33462 ATCCATTAGAAGTCCCATTAGTACCTGCAATATAAGAACCGGTTGATCTAATATTATGAA 33403 Query 156178 TATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGA 156237 |||| || ||||||||||| | ||||||||| ||| ||||| |||| ||||| Sbjct 33402 TATGAAGACCAATACCACCAGCAGTTTTAGAAATCAAAGCACATTCTTTTAAAGTATCAT 33343 Query 156238 AAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTC 156297 ||||||| ||||| ||||| |||| ||| | | || | || ||| | |||||||| Sbjct 33342 AAATACCATCAATGGAATCGTCTTTCATAGCAACAAGGAAACATGAAGACATTTGAGGTC 33283 Query 156298 GTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATAT 156357 |||||||||||| ||||||| || || | |||||| | ||||| | |||||| Sbjct 33282 TTGGTGTTCCAGCATTGAATAAAGTTGGAGATGCATGTGTGAAATATCTCAAAGACATCA 33223 Query 156358 AATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCA 156417 ||| || || ||| | || |||| || || || ||||| | || || || |||| Sbjct 33222 AATTATAAGTTTCCAAGACTTTTTCAATATCTGAACCATGAATCCCGACAGCAACTCTCA 33163 Query 156418 TCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTT 156477 | || ||| ||||| | || |||| ||||| |||| | | || | | || Sbjct 33162 TGATCAAATGTTGAGGTCTTTCAGCAATTTGTCCATTGATTCTTAATAAATACGATCTTT 33103 Query 156478 CCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAATCAAT--CATTTC 156535 ||| ||||| || || ||||||| | | | ||||| | | ||| |||| || | Sbjct 33102 CCAATGTTTTGAAACCAAAATAATTATATTGGAAATCTCTATCATAAACAATAGCACT-- 33045 Query 156536 ATCTAACTCAACCTGATATTTTTCCACA 156563 || ||| || | | || |||||| ||| Sbjct 33044 ATTTAAAACATCTTTATTTTTTTCTACA 33017 >seq571 Length=126323 Score = 111 bits (122), Expect = 5e-19 Identities = 332/499 (67%), Gaps = 15/499 (3%) Strand=Plus/Plus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 || ||||| || |||| | | || ||| || || || || |||||||| || || Sbjct 70131 CTGTCAAATCTTCCAGGTCTCATCAAAGCTTTATCCAAAATGTCCGCTCTGTTGGTACCT 70190 Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAA-ATTTGATT 288968 ||||| |||||||| ||| | | | || || |||| | | || | ||||| Sbjct 70191 GCCAAAACAACAATGTGTTCAGACGGAGTGAACCCGTCCA-ATTCAACAAGCAACTGATT 70249 Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttttt 289028 | ||| ||| ||||| || ||||| |||| || ||| | | ||| || ||| Sbjct 70250 CAATGTGGTTTCTCTTTCTTCGTTTGAGTTGCTTGCATTACC--ACTTCCTC-TTGCTTT 70306 Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 ||||| ||||| ||||| ||||||||||| | ||| || | || |||||| || Sbjct 70307 ACCAATGGCATCGATTTCATCAATGAAAATGATACATGGGGCGTTCATTCTCGCGGTTTT 70366 Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 || || ||||| || | || || |||| ||||||| ||||||| ||||| || || | Sbjct 70367 GAACAAGTCTCTGACTCTTGAAGCACCAACACCAACAAACATTTCAACAAACTCGGACCC 70426 Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 || || | |||| ||| ||||| || || || | |||| | ||||| Sbjct 70427 AGAAACAGAGAAAAATGGAACACCGGCTTCACCGGCAGTAGCTTTAGCCAACAAAGTCTT 70486 Query 289209 ACCTGTTCCAGGTGGTCC-CTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACT 289267 || || || || || || ||| || | | | || |||| | ||| || ||| || | Sbjct 70487 CCCGGTACCTGGGGGACCACTC-AAAATAGCACCTCTTGGAATTTTGGCACCA--AGTTT 70543 Query 289268 T--ATATTTCTCAGGGCTCTTT--AAAAATTCTACAATTTCCTCAAGTTCATATTTTGCC 289323 | ||||||| || | ||| |||||||| |||| ||| || ||| | |||||| Sbjct 70544 TTCGTATTTCT-TTGGATGTTTCAAAAAATTC-ACAAACTCCATAATTTCTTCTTTTGCT 70601 Query 289324 TCATCACATCCTGCTACAT 289342 |||||||| ||||| |||| Sbjct 70602 TCATCACAACCTGCAACAT 70620 >seq592 Length=141765 Score = 102 bits (112), Expect = 2e-16 Identities = 316/479 (66%), Gaps = 24/479 (5%) Strand=Plus/Minus Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTT-AAA 288941 || || ||||| ||||| ||||| | ||||| |||| || |||| |||| || ||| Sbjct 68196 TCCAAAATATCTGCTCTATTTGTCCCAGCCAAAACAATGATTTGTTCG-TTTGTTTCAAA 68138 Query 288942 TCCATCCATACTTGTTAAAATTTGATT--AAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999 || ||||| || | || || ||||| || || ||||| ||||||| |||| Sbjct 68137 ACCGTCCATTTCCACTAGCAACTGGTTCAAAGTGCTT--TCTCTTTCGTCATTTGCACCT 68080 Query 289000 CTTGAATC------ACCC----GAATCGCTCCttt--ttttACCAACAGCATCAATTTCG 289047 | ||| | ||| | || | ||| | || | |||| ||||||||| || Sbjct 68079 CCAGAACCCATACCACCGCCTTGTTTCCCGCCTCTGCTTCTCCCAATAGCATCAATCTCA 68020 Query 289048 TCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGG 289107 ||||||||||| | || |||| ||| | || | ||||| || || | ||| | Sbjct 68019 TCAATGAAAATAATGCATGGAGTCATTTCCCGAGCTTTGGCAAACAAGTCCCGTACTCTC 67960 Query 289108 GATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTT 289167 ||||| |||| ||| ||| ||||||| ||||| ||||| |||| || | ||| | Sbjct 67959 GATGCACCAACACCTACAAACATTTCCACAAACTCAGACCCGGAAACCGACAAGAAGGGA 67900 Query 289168 ACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCC- 289226 || |||||| || || || | |||| | || || ||||| || || ||||| Sbjct 67899 ACTCCTGCTTCTCCCGCAGTGGCTTTGGCCAACAACGTTTTCCCTGTACCTGGAGGTCCA 67840 Query 289227 CTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACT--TATATTTCTCAGGGCTC 289284 ||| || | | || |||| | ||||| | || | || | || ||||| || Sbjct 67839 CTC-AAAATGGCGCCTCTTGGAA--TTTGCGCTCCCAATTTGGTAAACTTTTCAGGAGTC 67783 Query 289285 TTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 || ||||| || |||| |||| || ||| | |||||||| || || ||||| || || Sbjct 67782 TTCAAAAACTCAACAAATTCCATAATTTCTTGCTTTGCCTCGTCGCACCCTGCCACGTC 67724 >seq710 Length=93100 Score = 96.9 bits (106), Expect = 1e-14 Identities = 176/254 (69%), Gaps = 4/254 (2%) Strand=Plus/Minus Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612 |||||| || |||||| ||||||| | |||| ||||| | |||||||||||||| Sbjct 35361 ATCATAGTGAACCATAATATCTTCCAAAGCTTTGACCAAACGTCTTTGAATATAACCAGT 35302 Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672 | || |||||| ||||| |||||||||| || | | ||| |||||||| || ||||| Sbjct 35301 TTCAGCTGTTTTCACAGCAGTATCAATTAACCCTTCTCTACCTCCCATAGCGTGAAAGAA 35242 Query 302673 TAGCTCTTCCGGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCG 302730 | |||| ||| || | || | ||| | | ||| |||| || ||||| | || Sbjct 35241 AAATTCTTGTGGT-GTCAAACCTCTCAA-ATATGAGTTCTCCACAAAACCTTTAGATTCA 35184 Query 302731 GGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATA 302790 || || | ||| |||| || ||||| | || || | || | || |||| ||| Sbjct 35183 GGAGAGTAATCGTCTTTGGAGAAATGTGGTAAAGTTCTATCAGCAAACCCAAATGGAATA 35124 Query 302791 CGCTTTCCATCAAC 302804 || || || ||||| Sbjct 35123 CGTTTACCTTCAAC 35110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471803626471717