Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq596 159 3e-34
seq506 159 3e-34
seq631 140 3e-28
seq664 96.9 3e-15
>seq596
Length=25494
Score = 159 bits (176), Expect = 3e-34
Identities = 176/232 (76%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 24713 TTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTA 24772
||| | ||||| |||| ||||| ||||| || || ||||| ||| || ||||||| |
Sbjct 12141 TTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCATC 12082
Query 24773 GA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTT 24831
|| |||| ||| | ||| ||||||||||||||||| || || || || |||||| | ||
Sbjct 12081 GATAACGTCAAAGCCAAA-ATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 12023
Query 24832 GATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAA 24891
||||||||| || ||||| |||| ||| |||| |||| || || |||||||||||
Sbjct 12022 GATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAA 11963
Query 24892 GGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCCA 24943
||||| || || |||||||| ||| ||||| | || || | | ||| |||
Sbjct 11962 AGAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGGTGTTATTGAACCA 11911
>seq506
Length=5049
Score = 159 bits (176), Expect = 3e-34
Identities = 176/232 (76%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| || || ||||||| | || |||||||| ||||| | ||||| ||| || |
Sbjct 1673 GATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCCTC 1732
Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
||||| | || || | |||| | ||| ||||||||||||||||| || || || || |
Sbjct 1733 TGACACCATTGACAATGTTAAAGCCAAA-ATCCAAGACAAAGAAGGTATCCCACCTGACC 1791
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
||||| | ||||||||||| || ||||| |||| ||| |||| |||| || || |
Sbjct 1792 AACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACA 1851
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933
|||||||||| ||||| || || |||||||| ||| ||||| | || || ||
Sbjct 1852 ACATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGGTGG 1903
>seq631
Length=151218
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || ||| ||||||| | || || ||||| || || | ||||| ||| || |
Sbjct 131177 ATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACCTTGGAAGTTGAATCCTCA 131236
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||||||||| || || || || |||
Sbjct 131237 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGACCAA 131296
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | ||||| ||||| || |||||| |||| || |||| |||| || || |||
Sbjct 131297 CAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCGACTACAAC 131356
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| |||||||| ||||| || |||||||| ||| ||||| | || ||
Sbjct 131357 ATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 131403
Score = 136 bits (150), Expect = 4e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| |||||| | || || | || || ||||| || || | ||||| ||| || |
Sbjct 131404 GATGCAAATCTTTGTGAAGACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCCTC 131463
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| ||||||||||| || || || || ||
Sbjct 131464 AGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGACCA 131523
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | ||||| ||||| || |||||| |||| || |||| |||| || || ||
Sbjct 131524 ACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACATTGTCCGACTACAA 131583
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| |||||||| ||||| || |||||||| ||| ||||| | || ||
Sbjct 131584 CATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 131631
>seq664
Length=41649
Score = 96.9 bits (106), Expect = 3e-15
Identities = 92/118 (78%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 139123 TATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTG 139182
||||| |||||||| |||||||||| | ||||| || |||||||||| ||||||
Sbjct 33952 TATTCCACAATTTCACAACACAAATTAGATGATTTGATAGTTCCTAAATTTTTTTGATTA 33893
Query 139183 CTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTG 139240
|||| |||||||||||||||||||| ||| | ||||| || ||||| |||||
Sbjct 33892 GATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGTACCTGTTTCAGTTTGTG 33835
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449893432823480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |