Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq596 159 3e-34 seq506 159 3e-34 seq631 140 3e-28 seq664 96.9 3e-15 >seq596 Length=25494 Score = 159 bits (176), Expect = 3e-34 Identities = 176/232 (76%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 24713 TTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTA 24772 ||| | ||||| |||| ||||| ||||| || || ||||| ||| || ||||||| | Sbjct 12141 TTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCATC 12082 Query 24773 GA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTT 24831 || |||| ||| | ||| ||||||||||||||||| || || || || |||||| | || Sbjct 12081 GATAACGTCAAAGCCAAA-ATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 12023 Query 24832 GATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAA 24891 ||||||||| || ||||| |||| ||| |||| |||| || || ||||||||||| Sbjct 12022 GATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAA 11963 Query 24892 GGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCCA 24943 ||||| || || |||||||| ||| ||||| | || || | | ||| ||| Sbjct 11962 AGAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGGTGTTATTGAACCA 11911 >seq506 Length=5049 Score = 159 bits (176), Expect = 3e-34 Identities = 176/232 (76%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || || ||||||| | || |||||||| ||||| | ||||| ||| || | Sbjct 1673 GATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCCTC 1732 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || || | |||| | ||| ||||||||||||||||| || || || || | Sbjct 1733 TGACACCATTGACAATGTTAAAGCCAAA-ATCCAAGACAAAGAAGGTATCCCACCTGACC 1791 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 ||||| | ||||||||||| || ||||| |||| ||| |||| |||| || || | Sbjct 1792 AACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACA 1851 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 |||||||||| ||||| || || |||||||| ||| ||||| | || || || Sbjct 1852 ACATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGGTGG 1903 >seq631 Length=151218 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| ||||||| | || || ||||| || || | ||||| ||| || | Sbjct 131177 ATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACCTTGGAAGTTGAATCCTCA 131236 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||||||||| || || || || ||| Sbjct 131237 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGACCAA 131296 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||| ||||| || |||||| |||| || |||| |||| || || ||| Sbjct 131297 CAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCGACTACAAC 131356 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||| ||||| || |||||||| ||| ||||| | || || Sbjct 131357 ATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 131403 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| |||||| | || || | || || ||||| || || | ||||| ||| || | Sbjct 131404 GATGCAAATCTTTGTGAAGACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCCTC 131463 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| ||||||||||| || || || || || Sbjct 131464 AGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGACCA 131523 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | ||||| ||||| || |||||| |||| || |||| |||| || || || Sbjct 131524 ACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACATTGTCCGACTACAA 131583 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| |||||||| ||||| || |||||||| ||| ||||| | || || Sbjct 131584 CATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 131631 >seq664 Length=41649 Score = 96.9 bits (106), Expect = 3e-15 Identities = 92/118 (78%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 139123 TATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTG 139182 ||||| |||||||| |||||||||| | ||||| || |||||||||| |||||| Sbjct 33952 TATTCCACAATTTCACAACACAAATTAGATGATTTGATAGTTCCTAAATTTTTTTGATTA 33893 Query 139183 CTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTG 139240 |||| |||||||||||||||||||| ||| | ||||| || ||||| ||||| Sbjct 33892 GATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGTACCTGTTTCAGTTTGTG 33835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449893432823480