Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq631 122 7e-23 seq506 120 3e-22 seq596 100 2e-16 >seq631 Length=151218 Score = 122 bits (134), Expect = 7e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG-CC 110328 ||||||||||| ||||| |||||||| || || |||||||| ||| | ||| || || Sbjct 131174 AAAATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACCTTGGAAGTTGAATCC 131233 Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388 | | || || ||| | | || || ||||| ||||||||||| | || || Sbjct 131234 TCA-GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGA 131292 Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448 ||||||||| | |||| ||| ||||||||| |||| || | |||||| || | || || Sbjct 131293 CCAACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCGACTA 131352 Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||| ||||| || || || | ||| |||| || ||| || |||| || Sbjct 131353 CAACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 131403 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG-CCTGA 110331 |||||||| ||||| || ||||| || || |||||||| || | ||| || ||| | Sbjct 131405 ATGCAAATCTTTGTGAAGACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCCTCA 131464 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || ||| | | || || ||||| ||||||||||| | || || || Sbjct 131465 -GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGACCA 131523 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||||||| | |||| ||| ||||||||| |||| || | ||||||| || | || ||||| Sbjct 131524 ACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACATTGTCCGACTACAA 131583 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||| ||||| || || || | ||| |||| || ||| || |||| || Sbjct 131584 CATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 131631 >seq506 Length=5049 Score = 120 bits (132), Expect = 3e-22 Identities = 178/250 (71%), Gaps = 7/250 (3%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCC 110328 || |||||||| || || |||||||| || || |||||||||||| | ||| || | || Sbjct 1671 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCC 1730 Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388 | || || | | | | || ||| || || ||||||||||| | || || Sbjct 1731 TCT-GACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTGA 1789 Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448 ||||||||| | || | ||| |||||||| |||| |||| ||||| || | || || Sbjct 1790 CCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTA 1849 Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG-----AAAA 110503 |||||||||||||||||| || | ||| |||| || ||| || |||| || |||| Sbjct 1850 CAACATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGGTGGTAAAAA 1909 Query 110504 AATAAATAAG 110513 || ||| ||| Sbjct 1910 AAGAAAGAAG 1919 >seq596 Length=25494 Score = 100 bits (110), Expect = 2e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 110282 TTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTGACGATACTGT 110340 ||||||||||| ||||| || || || || || | ||| || | ||| ||| || | Sbjct 12141 TTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTC-CGACACCAT 12083 Query 110341 CGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACT 110400 || | || ||| || || ||||||||||| | || || ||||||||| | Sbjct 12082 CGATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 12023 Query 110401 TATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAA 110460 || | ||| |||||||| |||| |||| ||||| || | || |||||||||||||| Sbjct 12022 GATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAA 11963 Query 110461 AGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||| || | ||| |||| || ||| || |||| || Sbjct 11962 AGAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 11924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412837871653313