Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq631 122 7e-23
seq506 120 3e-22
seq596 100 2e-16
>seq631
Length=151218
Score = 122 bits (134), Expect = 7e-23
Identities = 167/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG-CC 110328
||||||||||| ||||| |||||||| || || |||||||| ||| | ||| || ||
Sbjct 131174 AAAATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACCTTGGAAGTTGAATCC 131233
Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388
| | || || ||| | | || || ||||| ||||||||||| | || ||
Sbjct 131234 TCA-GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGA 131292
Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448
||||||||| | |||| ||| ||||||||| |||| || | |||||| || | || ||
Sbjct 131293 CCAACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCGACTA 131352
Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||| ||||| || || || | ||| |||| || ||| || |||| ||
Sbjct 131353 CAACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 131403
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG-CCTGA 110331
|||||||| ||||| || ||||| || || |||||||| || | ||| || ||| |
Sbjct 131405 ATGCAAATCTTTGTGAAGACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCCTCA 131464
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
|| || ||| | | || || ||||| ||||||||||| | || || ||
Sbjct 131465 -GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGACCA 131523
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
||||||| | |||| ||| ||||||||| |||| || | ||||||| || | || |||||
Sbjct 131524 ACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACATTGTCCGACTACAA 131583
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||| ||||| || || || | ||| |||| || ||| || |||| ||
Sbjct 131584 CATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 131631
>seq506
Length=5049
Score = 120 bits (132), Expect = 3e-22
Identities = 178/250 (71%), Gaps = 7/250 (3%)
Strand=Plus/Plus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCC 110328
|| |||||||| || || |||||||| || || |||||||||||| | ||| || | ||
Sbjct 1671 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCC 1730
Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388
| || || | | | | || ||| || || ||||||||||| | || ||
Sbjct 1731 TCT-GACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTGA 1789
Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448
||||||||| | || | ||| |||||||| |||| |||| ||||| || | || ||
Sbjct 1790 CCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTA 1849
Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG-----AAAA 110503
|||||||||||||||||| || | ||| |||| || ||| || |||| || ||||
Sbjct 1850 CAACATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGGTGGTAAAAA 1909
Query 110504 AATAAATAAG 110513
|| ||| |||
Sbjct 1910 AAGAAAGAAG 1919
>seq596
Length=25494
Score = 100 bits (110), Expect = 2e-16
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 110282 TTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTGACGATACTGT 110340
||||||||||| ||||| || || || || || | ||| || | ||| ||| || |
Sbjct 12141 TTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTC-CGACACCAT 12083
Query 110341 CGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACT 110400
|| | || ||| || || ||||||||||| | || || ||||||||| |
Sbjct 12082 CGATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 12023
Query 110401 TATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAA 110460
|| | ||| |||||||| |||| |||| ||||| || | || ||||||||||||||
Sbjct 12022 GATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAA 11963
Query 110461 AGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||| || | ||| |||| || ||| || |||| ||
Sbjct 11962 AGAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 11924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412837871653313
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |