Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq664 289 7e-73
seq627 163 7e-35
seq710 113 1e-19
seq693 91.5 3e-13
>seq664
Length=41649
Score = 289 bits (320), Expect = 7e-73
Identities = 582/860 (68%), Gaps = 5/860 (1%)
Strand=Plus/Plus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
||||||||||||||||| | ||| | | |||||| | | ||||||| | || |
Sbjct 33081 TATTTTGGTTTCAAAACATTGGAAAGATCGTATTTATTAAGAATCAATGGACAAATTGCT 33140
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
||| | |||||||| || | | | ||||| | || |||||||| |||||| ||
Sbjct 33141 GAAAGACCTCAACATTTGATCATGAGAGTTGCTGTCGGGATTCATGGTTCAGATATTGAA 33200
Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCT-ATTCATGCTACTCCTAC 110482
|| | ||| |||| || | | | | || | | | ||||| |||| ||
Sbjct 33201 AAAGTCTTGGAAACTTATAATTTGATGTCTTTGA-GATATTTCACACATGCATCTCCAAC 33259
Query 110483 CCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAA 110542
|||| || || ||||| || ||| || |||| || || ||| | | || ||
Sbjct 33260 TTTATTCAATGCTGGAACACCAAGACCTCAAATGTCTTCATGTTTCCTTGTTGCTATGAA 33319
Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAA 110602
|| ||||| ||||| |||||||||||| || | |||||| |||| | ||||||||||
Sbjct 33320 AGACGATTCCATTGATGGTATTTATGATACTTTAAAAGAATGTGCTTTGATTTCTAAAAC 33379
Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662
|||| || |||||| |||| ||||| ||||| | |||| || | |||| |||
Sbjct 33380 TGCTGGTGGTATTGGTCTTCATATTCATAATATTAGATCAACCGGTTCTTATATTGCAGG 33439
Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722
| || || |||| | |||| | |||||||| | ||||| ||||| | |||||||
Sbjct 33440 TACTAATGGGACTTCTAATGGATTGATTCCAATGATTAGAGTTTTCAATAATACTGCAAG 33499
Query 110723 ATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTG 110779
|||||| |||||||||| ||| ||| ||| | |||||| | ||| | ||||| ||
Sbjct 33500 ATATGTTGATCAAGGTGGTAATAAAAGACCTGGTGCTTTTGCTCTTTATTTAGAACCATG 33559
Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAG 110839
|||| ||||| ||||| || | || |||| |||||||| || |||||| ||
Sbjct 33560 GCATAGTGATATTTTTGATTTTATTGATATTCGGAAAAATCATGGTAAAGAAGAAATTAG 33619
Query 110840 AGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGA 110899
|||| | ||||| ||| |||| | ||| || |||||||||| ||| || ||| ||||
Sbjct 33620 AGCAAGAGATTTGTTTCCTGCATTATGGGTTCCAGATTTATTTATGCAAAAAGTTAAAGA 33679
Query 110900 AAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGG 110959
|||| ||| | | | | ||| | |||| ||| || |||||| |||||
Sbjct 33680 AAATTCAGATTGGACATTGTTTTCTCCAAGTGAAGCTCCAGGTTTAAGTGATGTTTATGG 33739
Query 110960 AAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAAT 111019
||| |||||| | | ||| | | ||||| |||||| | | | ||| ||
Sbjct 33740 TGCAGATTTTGAAAAATTGTACAATAGATATGTTTCAGAAGGAAGAGGTAGAAAAACTAT 33799
Query 111020 TCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTA 111079
| ||| ||| || | |||| ||| | ||| ||||| |||||| || || || |
Sbjct 33800 TAAAGCACAAAAATTATGGTATGCTATCTTGGAAGCACAAACTGAAACAGGTACACCATT 33859
Query 111080 TATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAA 111139
|||| | || |||||| | ||| ||||||||||||| ||||||||||| || ||
Sbjct 33860 TATTGTTTACAAAGATGCTTGTAACAAAAAATCTAATCAAAAAAATTTAGGAACTATCAA 33919
Query 111140 GTCTAGTAATTTGTGCTGTG 111159
|| ||||||||| ||||
Sbjct 33920 ATCATCTAATTTGTGTTGTG 33939
>seq627
Length=179744
Score = 163 bits (180), Expect = 7e-35
Identities = 465/705 (66%), Gaps = 21/705 (3%)
Strand=Plus/Plus
Query 131489 TTCTGGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAAATTAACC 131548
|| ||||||| ||||| |||||| | |||||||||| | || ||| | || ||
Sbjct 172720 TTTTGGACTGCAGAAGAAATCGATCTTTCCAAAGATATCCACGACTGGAATAATAGAA-- 172777
Query 131549 TTGAATGAAAA----AGATTTTG--TTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGAT 131602
|||||||||| ||||||| || | |||| | ||||| ||||| | |||
Sbjct 172778 -TGAATGAAAATGAAAGATTTTTCATTAGTAGAGTTTTAGCATTTTTCGCTGCTTCAGAT 172836
Query 131603 GGCATTGTTATTGAAAATCTTGTTATTAATTTCATTCAAGAAATTGATATTCCTGAAGTA 131662
|| ||||| | ||| ||| | || ||||||| | ||| | | ||||| ||||
Sbjct 172837 GGGATTGTCAATGAGAATTTGGTGGAGAATTTCAGTGCTGAAGTGCAGATTCCAGAAGCT 172896
Query 131663 ACATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTA 131722
| || || ||| || ||| | | ||| ||| ||||| || | ||||| |
Sbjct 172897 AAATGTTTTTACGGGTTCCAAATCATGATGGAAAATATCCATAGTGAAACATATTCGCTT 172956
Query 131723 TTGATTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATTATTTG---ATGCTGTA 131779
||||| || | | | | ||| || | | || || | |||| || ||||| |
Sbjct 172957 TTGATCGATACTTATATCAAAGATCCAAAAGA---AAGTGAATTCTTGTTCAATGCTATT 173013
Query 131780 AATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGAT 131839
| | |||| ||| ||| | ||||| ||||||||||||| |||||||||||||||
Sbjct 173014 GAAACTATTCCACAAATCAAAGAAAAAGCTGAATGGGCTATTAGATGGATTCAAGATGAA 173073
Query 131840 TCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCA 131899
|| ||| || |||| | || || |||||| |||||||||| | ||||||||
Sbjct 173074 GATGCATTATTTGCTGAAAGATTGGTGGCATTTGCTGCTGTTGAAGGTGTTTTCTTTTCC 173133
Query 131900 GGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTG 131959
||| | || ||| || |||||| | ||||| || |||||||| || | | ||
Sbjct 173134 GGTTCATTTGCTGCAATTTTTTGGTTAAAGAAAAAGGGGTTGATGCCAGGTTTGACTTTT 173193
Query 131960 TCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCTATAT-TAATCTA 132018
|| ||| |||| || | |||||||||| | || ||||| ||||| || | || | |
Sbjct 173194 TCAAATGAATTGATTTGTAGAGATGAAGGGCTACACACTGATTTTGC-ATGTCTATTATT 173252
Query 132019 TAGAAAATTTGCTGATAAACTTGATGAAAATAAT--ATTAAACAACTTATAAGCGAAGCA 132076
| | | || | |||||| ||| ||| ||| | ||| || |||| | |||||
Sbjct 173253 TCAACATTTGGAAAATAAACCAGATCCAAA-AATCGCTGAAAGAA-TTATTACTGAAGCT 173310
Query 132077 GTTGATATCGAGAAGGAGTTTATTACAGAAGCTTTGCCTTGCAATTTGATTGGGATGAAT 132136
||| ||| || || | | || ||| || |||||| ||| | || ||||||
Sbjct 173311 GTTTCTATTGAAAAAAGATATTTTGAAGATGCATTGCCTGTTTCTTTATTAGGTATGAAT 173370
Query 132137 GCTGACTCTATGAAGGAGTACATTGAATTCGTTGCTGATCGTTTA 132181
|||| | ||||| | || ||||||| ||||||||| | |||
Sbjct 173371 GCTGCATTGATGAATCAATATGTTGAATTTGTTGCTGATAGATTA 173415
>seq710
Length=93100
Score = 113 bits (124), Expect = 1e-19
Identities = 133/180 (74%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 305306 AGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATG 305365
|||||| | ||||||||||| || || ||||| || ||||| || |||| ||||||
Sbjct 34102 AGACATATTGTTGACAATGATTTTGTGCTTTTCAACAGACAACCTTCTTTGCACAAAATG 34161
Query 305366 TCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGT 305425
||||||||| |||| | ||| ||||| | | | || ||| |||| ||| || |
Sbjct 34162 TCTATGATGTCTCACAGAGTTAAAGTGATGCCATATTCTACGTTTAGATTGAATTTATCT 34221
Query 305426 GCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485
| | | || |||||||| ||||||||||| |||||||||||| | || || ||||||
Sbjct 34222 GTTACCTCTCCGTATAATGCAGATTTTGATGGGGATGAAATGAATTTACACGTTCCTCAA 34281
Score = 95.1 bits (104), Expect = 3e-14
Identities = 174/249 (70%), Gaps = 12/249 (5%)
Strand=Plus/Minus
Query 72169 ACTTTGCCAAACACAACGTGTTTGTTATTTAAATGTGGTTGAGGTGC-----AAGT-GTA 72222
||||| |||||||||||||||||||||| | ||| | ||| || | || ||
Sbjct 31594 ACTTTCCCAAACACAACGTGTTTGTTATCCAGATGGGTCAAAGGAGCGTTGGATGTTGTT 31535
Query 72223 ATGAAGAATTGCGAGTTATTTGAATCAGGACCCGAGTTAGCCATAG--AAACCAAACCTG 72280
||||| |||| ||| ||| | | || || | || |||||| ||| ||| ||
Sbjct 31534 ATGAAACATTGTGAGCCATTGGTGTTTGGTCCAGCATTGGCCATACTCAAAAGAAA--TG 31477
Query 72281 CTTCTGAATGCTTTAATAA-GAAATTCTCATCTTCAAAAGTTTCTCCATATATACTTTGA 72339
| | | || |||| | |||||| ||||||||||| |||| ||||| ||||||| |
Sbjct 31476 GTCCAGTGTG-TTTATGAGTGAAATTTTCATCTTCAAACTTTTCACCATAAATACTTTCA 31418
Query 72340 CCTGAGCTTCCATCAAAGTTCACAATATCACCTCCTTGAACCATAAAATTATTAATTACT 72399
|| | | ||||| ||||| || |||||| ||||| ||| |||| ||| || |||
Sbjct 31417 CCACCGGTCCCATCGAAGTTTGTAAAATCACCAAATTGAAGCATGAAATCATTGATGACT 31358
Query 72400 CTATGGAAA 72408
|| ||||||
Sbjct 31357 CTGTGGAAA 31349
>seq693
Length=168755
Score = 91.5 bits (100), Expect = 3e-13
Identities = 117/158 (74%), Gaps = 4/158 (3%)
Strand=Plus/Plus
Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389
||||| ||||| || ||||| || | || | | | ||||| || | ||| | | |||
Sbjct 19538 GTTCTTTTCAACAGACAACCGTCCTTACACAGACTATCTATTTTGTCCCATTATGCAAAA 19597
Query 305390 GTATTATCT-GGATTGACATTTC-GATTAAATGTAAGTGCTTGTACGCCTTATAATGCGG 305447
|| | || ||| || |||| |||| || | | ||| |||||| || |||||||| |
Sbjct 19598 GTCAGACCTTGGA--GAACTTTCAGATTGAACGAATGTGTTTGTACACCATATAATGCAG 19655
Query 305448 ATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485
|||||||||| |||||||||||| ||||||| || |||
Sbjct 19656 ATTTTGATGGTGATGAAATGAATTTGCATGTGCCACAA 19693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186801532325101
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |