Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq596 123 6e-23 seq506 123 6e-23 seq631 122 2e-22 >seq596 Length=25494 Score = 123 bits (136), Expect = 6e-23 Identities = 155/209 (74%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| |||||| | || || || || |||||| | ||||| ||| || ||||| | Sbjct 12142 TTTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCAT 12083 Query 206238 CGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGAC 206296 ||| || ||||| ||| || ||||| |||||||| ||| || ||| |||||| Sbjct 12082 CGATAACGTCAAAGCCAAA-ATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGAT 12024 Query 206297 TTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGA 206356 | ||||| || || || || ||||||||||| || |||||| | || |||||| | || | Sbjct 12023 TGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAA 11964 Query 206357 AAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 |||| || ||||||||| | || |||||| Sbjct 11963 AAGAATCCACTCTTCACTTGGTCTTGAGA 11935 >seq506 Length=5049 Score = 123 bits (136), Expect = 6e-23 Identities = 150/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | ||||| ||||| || || |||||||| ||| |||||||| | || Sbjct 1689 AAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCCTCTGACACCATTGACAAT 1748 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| || ||||| |||||||| || || ||| |||||| | ||||| Sbjct 1749 GTTAAAGCCAAA-ATCCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCTT 1807 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || || || ||||||||||| || |||||| | || |||||| | || ||||| || Sbjct 1808 TGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAAGAATC 1867 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 || |||||| | ||||||||| Sbjct 1868 CACCCTTCACTTGGTTTTGAGA 1889 >seq631 Length=151218 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || ||||| |||||||||||||| ||| || ||||| |||| || ||| Sbjct 131429 ACTGGGAAAACCATCACTTTGGAAGTTGAATCCTCAGACACCATCGACAACGTCAAGTCC 131488 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || |||||||| ||| || ||| |||||| | || || || || || Sbjct 131489 AAGATCCAGGACAAAGAAGGGATTCCACCTGACCAACAAAGATTGATTTTTGCTGGTAAA 131548 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||||||||||| || || || ||| |||| |||||| |||| || ||||| || || ||| Sbjct 131549 CAGTTGGAAGACGGCAGAACATTGTCCGACTACAACATCCAAAAGGAGTCGACCCTCCAC 131608 Query 206374 CTTGTTTTGAGA 206385 | ||||||||| Sbjct 131609 TTGGTTTTGAGA 131620 Score = 120 bits (132), Expect = 7e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || ||||| ||||| |||||||| ||| || ||||| |||| Sbjct 131192 AAAACTTTGACTGGGAAAACCATCACCTTGGAAGTTGAATCCTCAGACACCATCGACAAC 131251 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || |||||||| ||| || ||| |||||| | || || Sbjct 131252 GTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGACCAACAAAGATTGATTTTT 131311 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || ||||||||||| || || || ||| |||| |||||| |||| || ||||| Sbjct 131312 GCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCGACTACAACATCCAAAAGGAGTCG 131371 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 || || ||| | ||||||||| Sbjct 131372 ACCCTCCACTTGGTTTTGAGA 131392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181809579719461