Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq596 123 6e-23
seq506 123 6e-23
seq631 122 2e-22
>seq596
Length=25494
Score = 123 bits (136), Expect = 6e-23
Identities = 155/209 (74%), Gaps = 3/209 (1%)
Strand=Plus/Minus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| |||||| | || || || || |||||| | ||||| ||| || ||||| |
Sbjct 12142 TTTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCAT 12083
Query 206238 CGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGAC 206296
||| || ||||| ||| || ||||| |||||||| ||| || ||| ||||||
Sbjct 12082 CGATAACGTCAAAGCCAAA-ATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGAT 12024
Query 206297 TTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGA 206356
| ||||| || || || || ||||||||||| || |||||| | || |||||| | || |
Sbjct 12023 TGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAA 11964
Query 206357 AAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|||| || ||||||||| | || ||||||
Sbjct 11963 AAGAATCCACTCTTCACTTGGTCTTGAGA 11935
>seq506
Length=5049
Score = 123 bits (136), Expect = 6e-23
Identities = 150/202 (74%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | ||||| ||||| || || |||||||| ||| |||||||| | ||
Sbjct 1689 AAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCCTCTGACACCATTGACAAT 1748
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||||| ||| || ||||| |||||||| || || ||| |||||| | |||||
Sbjct 1749 GTTAAAGCCAAA-ATCCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCTT 1807
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| || || || ||||||||||| || |||||| | || |||||| | || ||||| ||
Sbjct 1808 TGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAAGAATC 1867
Query 206364 TACTCTTCACCTTGTTTTGAGA 206385
|| |||||| | |||||||||
Sbjct 1868 CACCCTTCACTTGGTTTTGAGA 1889
>seq631
Length=151218
Score = 122 bits (134), Expect = 2e-22
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || ||||| |||||||||||||| ||| || ||||| |||| || |||
Sbjct 131429 ACTGGGAAAACCATCACTTTGGAAGTTGAATCCTCAGACACCATCGACAACGTCAAGTCC 131488
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| || || |||||||| ||| || ||| |||||| | || || || || ||
Sbjct 131489 AAGATCCAGGACAAAGAAGGGATTCCACCTGACCAACAAAGATTGATTTTTGCTGGTAAA 131548
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||||||||||| || || || ||| |||| |||||| |||| || ||||| || || |||
Sbjct 131549 CAGTTGGAAGACGGCAGAACATTGTCCGACTACAACATCCAAAAGGAGTCGACCCTCCAC 131608
Query 206374 CTTGTTTTGAGA 206385
| |||||||||
Sbjct 131609 TTGGTTTTGAGA 131620
Score = 120 bits (132), Expect = 7e-22
Identities = 147/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || || ||||| ||||| |||||||| ||| || ||||| ||||
Sbjct 131192 AAAACTTTGACTGGGAAAACCATCACCTTGGAAGTTGAATCCTCAGACACCATCGACAAC 131251
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || |||||||| ||| || ||| |||||| | || ||
Sbjct 131252 GTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGACCAACAAAGATTGATTTTT 131311
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || || ||||||||||| || || || ||| |||| |||||| |||| || |||||
Sbjct 131312 GCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCGACTACAACATCCAAAAGGAGTCG 131371
Query 206365 ACTCTTCACCTTGTTTTGAGA 206385
|| || ||| | |||||||||
Sbjct 131372 ACCCTCCACTTGGTTTTGAGA 131392
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181809579719461
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |