Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq596 127 2e-24
seq506 125 6e-24
seq631 89.7 5e-13
>seq596
Length=25494
Score = 127 bits (140), Expect = 2e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243
||||| ||||| ||||| || || | ||||| | ||||||||| || ||| || |||
Sbjct 12141 TTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCATC 12082
Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303
|| | || ||| ||||| || ||||| ||||| || || || || |||||| |
Sbjct 12081 GATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 12022
Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAA 25363
|| | | || |||||| | ||||||| ||||| | | || ||||| |||||||||
Sbjct 12021 ATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 11962
Query 25364 GAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|||||||| |||| || || || ||||||||||| ||
Sbjct 11961 GAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 11924
>seq506
Length=5049
Score = 125 bits (138), Expect = 6e-24
Identities = 167/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 25170 ACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAG 25229
|||| |||||| | || || ||||| || || || ||| | || || | |||||||||
Sbjct 1669 ACAAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAAT 1728
Query 25230 CCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCG 25289
|| || || || || | || ||| ||||| || ||||| ||||| || || |
Sbjct 1729 CCTCTGACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTG 1788
Query 25290 ATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATT 25349
| || |||||| | || | | || |||||| | ||||||| ||||| | | || |
Sbjct 1789 ACCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACT 1848
Query 25350 ACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|||| |||||||||||||||||| |||| || || || ||||||||||| ||
Sbjct 1849 ACAACATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGG 1900
>seq631
Length=151218
Score = 89.7 bits (98), Expect = 5e-13
Identities = 160/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231
|| |||||| | ||||| ||||| || || || ||| | ||||| | ||||| ||| ||
Sbjct 131174 AAAATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACCTTGGAAGTTGAATCC 131233
Query 25232 AACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGAT 25291
|| || ||||| | || || || || || ||||| || || || || ||
Sbjct 131234 TCAGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGAC 131293
Query 25292 CAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATT 25349
|| |||||| | |||| | || ||||| | ||||| | |||| |||| ||| |
Sbjct 131294 CAACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTC--CGACT 131351
Query 25350 ACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|||| || ||||| || || ||| | || || || || ||||||||||| ||
Sbjct 131352 ACAACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 131403
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||| || || || || || ||| | ||||| | ||||| ||| ||
Sbjct 131405 ATGCAAATCTTTGTGAAGACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCCTCA 131464
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || ||||| | || || || || || ||||| || || || || || ||
Sbjct 131465 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGACCAA 131524
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|||||| | |||| | || ||||| | ||||| | |||| |||| ||| ||||
Sbjct 131525 CAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACATTGTC--CGACTACA 131582
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| || ||||| || || ||| | || || || || ||||||||||| ||
Sbjct 131583 ACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 131631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445090277313120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |