Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq506 156 4e-33
seq631 145 8e-30
seq596 129 6e-25
>seq506
Length=5049
Score = 156 bits (172), Expect = 4e-33
Identities = 176/233 (76%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || ||| || | ||| || |||||||| ||||||||||||||||| | |
Sbjct 1900 CCACCTCTCAATCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGAC 1841
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | ||||| || ||||| ||||| | || || || || ||
Sbjct 1840 AAAGTTCTACCA-TCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 1782
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| |||||||| ||||| ||||| ||| || ||| | ||||| || ||||| ||
Sbjct 1781 GATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGAC 1722
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGT 134718
|| | |||||||||||||| || ||||||||||||||||||||||| ||||
Sbjct 1721 TTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTTGT 1669
>seq631
Length=151218
Score = 145 bits (160), Expect = 8e-30
Identities = 178/239 (74%), Gaps = 3/239 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545
|| ||||| | || ||| || | ||| || || || |||||||| |||||||||||| |
Sbjct 131403 CCACCTCTCAATCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGAC 131344
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|||| | || ||| || | |||||| || ||||||||||| | || || || || ||
Sbjct 131343 AACGTTCTGCC-GTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGG 131285
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| |||||||| || || || || ||||| ||| | ||||| || ||||| ||
Sbjct 131284 AATCCCTTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAAC 131225
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTTTGT 134724
|| | || |||||||| || || ||||||||||| |||||||||||||| || ||||
Sbjct 131224 TTCCAAGGTGATGGTTTTCCCAGTCAAAGTTTTAACAAAAATTTGCATTTT-TTATTGT 131167
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545
|| ||||| | || ||| || | ||| || || || |||||||| |||||||||||| |
Sbjct 131631 CCACCTCTCAATCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGAC 131572
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | || ||| || | |||||| || ||||||||||| | || || || || ||
Sbjct 131571 AATGTTCTGCC-GTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGG 131513
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| |||||||| || || || || ||||| ||| | ||||| || ||||| ||
Sbjct 131512 AATCCCTTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAAC 131453
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||| |||||||| || || ||||| || || || ||||||||
Sbjct 131452 TTCCAAAGTGATGGTTTTCCCAGTCAAAGTCTTCACAAAGATTTGCAT 131405
>seq596
Length=25494
Score = 129 bits (142), Expect = 6e-25
Identities = 162/220 (74%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || ||| || | ||| || |||||||| ||||||||||||||||| | |
Sbjct 11924 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 11983
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | ||||| || ||||| ||||| | || || || || ||
Sbjct 11984 AAAGTTCT-ACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 12042
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| |||||||| ||||| ||||| |||||| || | |||||||| ||||| ||
Sbjct 12043 AATACCTTCTTTGTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGAC 12102
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705
|| ||||| || || ||||| ||||| ||||| || |||
Sbjct 12103 TTCTAGAGTGATAGTCTTACCAGTTAAGGTTTTGACAAAA 12142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505393718747320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |