Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq664 486 3e-132 seq627 307 1e-78 >seq664 Length=41649 Score = 486 bits (538), Expect = 3e-132 Identities = 1465/2242 (65%), Gaps = 55/2242 (2%) Strand=Plus/Minus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 |||||||| |||| | || || | || || | | |||||||| || ||||||| | Sbjct 34915 GTAAACTGGATGGCAGCAGAAGCAGCTTGGGTTCTCAAGTAGTACATCCCTGTTTTCAAA 34856 Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493 ||| | ||| |||||||||||||| || ||||| |||| | || Sbjct 34855 CCTTTAGACCACCCGTAGAAATGCATGGAGGTCAGTTTCCCCATTGTTGGGGCCATGATG 34796 Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553 || ||||| | || ||| |||||| |||||||| ||| || || ||||| | || Sbjct 34795 TGGATATTTAGAGAGTGAGATTGATCAATGAAAGCGGATCTGTCAGCAGCCATGTCGATG 34736 Query 68554 ATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG 68613 || ||||||||| | |||||||| || || | | | ||| | || | |||| | Sbjct 34735 ATCGTCTTTTGAGACAATTCCCAAACTGTTTTGTACAAGTCTTTCAATTCTTGAGGAATG 34676 Query 68614 CTCGTA---TTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTC 68670 | | | ||||||||| || | || || || | || || |||| ||| Sbjct 34675 TTTGGCAAGTGTTGAATGGACCCGTTGTTGGCAATGATGTTTGATTTCATAGCATCGTTC 34616 Query 68671 CACAATTTTCTC-TCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCC 68729 || ||| | || ||| |||| || | | ||||| || ||||| ||||| || Sbjct 34615 CA-AATGCCCAAATCAACCAAATCTCTTAGCAAGTATGGATTGACAATTTGGAATTCACC 34557 Query 68730 AGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCC 68789 ||| ||| ||| | || ||| || || || ||||||| | | |||| || | || Sbjct 34556 AGACAACGTTCTTCTAGAGTACATGTTTGAAGTGAATGGTTCGAAACATTCGTTGTAACC 34497 Query 68790 CAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 68849 || ||||| | |||||||| |||||||| || |||| || || ||||| | || Sbjct 34496 CAAGATTTGCGATGTTGATGCTGTTGGCATTGGAGCCAATAACAATGAGTTTCTCAATCC 34437 Query 68850 ATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATT 68909 | | | ||||| ||| | | | || ||| ||||| | ||||| ||| | || Sbjct 34436 AGTTTCCACAATTTTTTCTCTCAAAGATTCCCATTCCCACAAATCAGTTGGAGCTCTATC 34377 Query 68910 CCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGG 68969 ||| | || |||| | || || | || ||| || | | | || || || Sbjct 34376 CCACATGTCAAATTGCAAAACACCTTGTGAAGCTGGTGAACCTTGGAAAGATTGGTATGG 34317 Query 68970 TCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAA 69029 ||||| | | || | ||| | || |||||| | | || | ||||||||| Sbjct 34316 ACCTTCTTCCACGGCCATTTCGTTTGAAGATTCCAATGCAGCATGGTACAATGTTTCGAA 34257 Query 69030 AATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGT-AAAAGAATAA 69088 ||| | |||| || | || |||| | ||| |||||| | | | ||||| |||| Sbjct 34256 AATTTGAATATTCAGTTGTTTGGCTTGTTCGGAATCAAATGGA-ATTCTCAAAAGCATAA 34198 Query 69089 ATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAA---C 69145 | | ||| ||||| || ||||| |||| | |||||||| |||||| ||||||| | Sbjct 34197 AAGTATCAGCCAAACCTTGAACACCAAGGGCAATAGGTCTGTGTCTCATATTTGAGTTTC 34138 Query 69146 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACTA 69205 || ||| ||| | ||| |||||||| | || || | | | || | ||||| | Sbjct 34137 TTGCAGTTTCC---ACAGGGTAATAATTTCTGTCAATGACTCTGTTCAAATTTCTTGTAA 34081 Query 69206 CTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA---------TCGTCCATCTATAA 69256 ||||| | || || | || ||| | |||||| | | | |||||| | Sbjct 34080 TGACTTTTGCAACATCGTGTAATTTTTGGAAATCATAAGTTTGTTGTTGACCATCT-TCT 34022 Query 69257 CAAACAT--ATT--------CAGTGCTACAGATGCTAGATTACAAACTGC---TACCTCA 69303 |||||| || || || | ||| || | ||||||||| || | | || Sbjct 34021 GAAACATTGATGAAAGCGGGCAAAGCAATAGAAGCCAAATTACAAACAGCAGTTTCGTCG 33962 Query 69304 TTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGA 69363 ||| | || ||||| | || || ||| | |||| |||||||||| || | | Sbjct 33961 TTA---TCTGAATATTCCACAATTTCACAACACAAATTAGATGATTTGATAGTTCCTAAA 33905 Query 69364 TTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTT 69423 |||| |||||| ||||||||||| || || ||||||| |||||| || ||||| ||| Sbjct 33904 TTTTTTTGATTAGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGTACCTGTT 33845 Query 69424 TCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAA 69483 ||| | || | ||| | |||| | ||| | || |||| || | | || || Sbjct 33844 TCAGTTTGTGCTTCCAAGATAGCATACCATAATTTTTGTGC-TTTAATA-GTTTTTCTAC 33787 Query 69484 CGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCAT 69541 | |||| ||| ||||| | || | ||| || || | || |||||||| Sbjct 33786 CTCTTCCTTCTGAAACATATCTATTGTACAATTTTTCAAAATCTGCACCATAAACATCAC 33727 Query 69542 CCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTT 69601 || || ||| |||| ||||| | | ||||| ||| | || || |||||| || Sbjct 33726 TTAAACCTGGAGCTTCACTTGGAGAAAACAATGTCCAATCTGAATTTTCTTTAACTTTTT 33667 Query 69602 TCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCAT 69661 |||||||| ||| |||| ||| | || ||| | |||||| | |||| ||||||| | Sbjct 33666 GCATAAATAAATCTGGAACCCATAATGCAGGAAACAAATCTCTTGCTCTAATTTCTTCTT 33607 Query 69662 TTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGAT 69721 | || |||||| || ||| | ||| || | ||||||| |||||||||||||| || Sbjct 33606 TACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATGCCATGGTTCTAAAT 33547 Query 69722 ATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTAT 69781 | | || | | || |||| |||||| || || ||||| | ||||| ||||| |||| Sbjct 33546 AAAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTTGCAGTATTAT 33487 Query 69782 TATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAAC 69841 | | ||||| | ||| ||||| | |||||||| | ||||| || || | ||||||| Sbjct 33486 TGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTCCCATTAGTACCTGCAATATAAG 33427 Query 69842 TTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTA 69901 || ||| | ||||||| |||| ||||| || || || || ||||||| || | Sbjct 33426 AACCGGTTGATCTAATATTATGAATATGAAGACCAATACCACCAGCAGTTTTAGAAATCA 33367 Query 69902 GAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAA 69961 |||||| ||| || || ||||| ||||| || ||| ||| ||| |||| || || Sbjct 33366 AAGCACATTCTTTTAAAGTATCATAAATACCATCAATGGAATCGTCTTTCATAGCAACAA 33307 Query 69962 GAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGT 70021 | ||||| |||||||||| | | ||||| ||||| ||||| || |||||||| | Sbjct 33306 GGAAACATGAAGACATTTGAGGTCTTGGTGTTCCAGCATTGAATAAAGTTGGAGATGCAT 33247 Query 70022 GAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACT 70081 | ||||| || | ||| | || ||| || ||||| | || ||| ||||| | Sbjct 33246 GTGTGAAATATCTCAAAGACATCAAATTATAAGTTTCCAAGACTTTTTCAATATCTGAAC 33187 Query 70082 GATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTAT 70141 |||||| || | || || | ||| | || ||| ||||||| ||| | ||| || Sbjct 33186 CATGAATCCCGACAGCAACTCTCATGATCAAATGTTGAGGTCTTTCAGCAATTTGTCCAT 33127 Query 70142 TTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGT 70201 | ||| | || | || ||| |||||| ||||| || |||||||| || ||| || | Sbjct 33126 TGATTCTTAATAAATACGATCTTTCCAATGTTTTGAAACCAAAATAATTATATTGGAAAT 33067 Query 70202 CTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCATAA 70261 |||| || |||| |||| || ||||| ||| |||| ||| || || | |||| Sbjct 33066 CTCTATCATAAACAATAGCACTATTTAAAACATCTTTATTTTTTTCTACAAT-TTGATAA 33008 Query 70262 CAGT-AGGTGAGATAATCGGAGATCGTTTA--CCATTTTTAGGATTAACATAGTTGAATA 70318 || | || || |||||| |||| |||||||| ||||||||| ||| Sbjct 33007 ACGTCATCACTAATCATTGGAGAT--TTTAATCCATTTTTTTCATTAACATAAAAATATA 32950 Query 70319 AATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTA 70378 ||||| || || | | |||| ||||||| |||| || |||||||| || || || | Sbjct 32949 AATCTGAAATGACTTGAGAAAATTGTTTTTTAGTTTGTTTATGTAAATTAGAAATAGCAA 32890 Query 70379 TTCTGGCTGCTAGAATAGCATAGTCAGGATG--TTGT-GTAGTACAAGTAGCTGCTATTT 70435 |||| || || | ||||||| |||||||| | || || || ||| | || ||| Sbjct 32889 TTCTTGCAGCCAATGTAGCATAATCAGGATGAATAGTGGTCATATAAGCACATG---TTT 32833 Query 70436 CCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTT 70495 | ||||| || |||| ||||| ||||| ||||| || | ||| | || |||| | Sbjct 32832 CAGCAGCCAAATTATCCAATTCAATAGTAGTAACACCTTCATAAACACCAGATATAATTC 32773 Query 70496 TCATGGCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAACATAATTTTCTAA 70555 | | || | |||||| || | || | | ||||||||||||| | || Sbjct 32772 TTTGTGTAATAGAAACAGGATCAATATGGTTTGGATCTAAACCATAACATAATCTAGCAA 32713 Query 70556 TACGAGATGTAATTTTATCAAA 70577 | | ||| || ||||||||||| Sbjct 32712 TTCTAGAAGTGATTTTATCAAA 32691 >seq627 Length=179744 Score = 307 bits (340), Expect = 1e-78 Identities = 619/906 (68%), Gaps = 18/906 (2%) Strand=Plus/Minus Query 39307 TTGTGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTT 39366 || || |||||| || |||||| || ||| ||| | ||| || || ||||| ||||| Sbjct 173553 TTTTGCCATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTT 173494 Query 39367 GCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAttttttttt 39426 ||| | ||||| ||||||||||| |||||||| ||||| | ||||||| | ||||| Sbjct 173493 ACCTGCTAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTC 173434 Query 39427 AAATCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTC 39486 | |||||| | | |||||||| ||||||||||| | ||| ||||||| | | Sbjct 173433 ATTACCTAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGC 173374 Query 39487 ACAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTT-CGATGT 39545 | |||||| |||| | ||| || | || || | | || ||||||| | || Sbjct 173373 AGCATTCATACCTAATAAAGAAACAGGCAATGCATCT-TCAAAATATCTTTTTTCAATAG 173315 Query 39546 CTACGGCCTCTGTTATTATCGATGTTACTACC--TCATCACTC-GGTGGATGCAATAAAT 39602 || || || || || || | || | | | | || ||| || |||| Sbjct 173314 AAACAGCTTCAGTAATAAT---TCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAAT 173258 Query 39603 GTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGT 39662 ||| ||| | || || || || ||| ||||| || |||||||||| ||| ||||| | Sbjct 173257 GTTGAAATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCAT 173198 Query 39663 TAGAAAATGTGAGTCCAGGCATTAGACCACGCTTT-TTGAGCCAAAATATGGCAGCAAAA 39721 | ||||| || | || ||||| | ||| | ||| || | |||||| || |||||||| Sbjct 173197 TTGAAAAAGTCAAACCTGGCATCA-ACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAAT 173139 Query 39722 GATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTT 39781 || || |||||||| | ||||| || || |||||||| || | ||| || | | | Sbjct 173138 GAACCGGAAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAAT 173079 Query 39782 GTATCATTATGT---ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTT-ACACAAGGCAT 39837 | ||| | || | ||||| | ||||| |||||||| |||||| | || || Sbjct 173078 GCATCTTCATCTTGAATCCATCTAATAGCCCATTCAGCTTT-TTCTTTGATTTGTGGAAT 173020 Query 39838 TGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTAT 39897 ||||| |||||||| || | | | |||| | |||||| | ||| ||||| || Sbjct 173019 AGTTTCAATAGCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGAT 172960 Query 39898 TAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACA 39957 || || ||| |||| |||||| ||||| ||| || || || ||||||||||| Sbjct 172959 CAAAAGCGAATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACA 172900 Query 39958 TCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTAT 40017 | | ||||| | ||| || || || | || || | ||| ||||||| ||||| || || Sbjct 172899 TTTAGCTTCTGGAATCTGCACTTCAGCACTGAAATTCTCCACCAAATTCTCATTGACAAT 172840 Query 40018 TCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGT 40077 ||||| ||| || |||||||| || || |||| ||| || |||||| | Sbjct 172839 CCCATCTGAAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATT 172780 Query 40078 CAAT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAA 40134 || | ||||||||||| | ||||||||| || | ||| | |||||| || |||||||| Sbjct 172779 CATTCTATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAA 172720 Query 40135 CGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAAC 40194 || || || || |||||| | ||| || ||| | |||| |||||||| | ||| Sbjct 172719 TGAAGCTTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAAC 172660 Query 40195 AAATCT 40200 |||||| Sbjct 172659 AAATCT 172654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686902437507240